Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g1455 ATGAGAGAGAAATTGAGAAAGGAGACATGGTGGGAGGAAGAGGAATCTCCGAGATGCGTACTAGAGATGACGGCGGAATCAGACAGAGGAAGAAGCAGCGGCAGATGCAGGAAGGGAGTGATGGAAGCATTGAGGATGAACTCAGTGAAGAGACTATCAGCCATTCCATTGTTTTCTTCAACATACATGATTTCTCGTAAGAGTTTAAGGAAACTGACGAGGATGAGGAGTGCAGAAGAAACCCATGAACATGATTCTCCCACATGGAAAACATTCGATTACTCCGACCTTGTTGCTGCCACCGATGATTTTTGTTCGGAGAATTTGGTGGGGAAAGGTGGGAATGCTGAGGTATACAGAGGGAGGTTAGCAGATGGGAGGATCGTGGCAGTAAAGAAGCTTATGAATGAGGAAAAGAATGATGCAGATCAAACGGGTGATTTCTTGACGGAGATTGGAATCATTGGACACATCAAACATCATAATTCTTGTGAAGTGATTGGCTTTGGAATTGAAAATGGACTCTTCTTGGTCCTTCACTATGCAGTTCATGGCAGCCTCGCCTCACTTCTCTTCGGTTCGGAAAAGCTAGAGTGGAATGTTAGGTTCAAGGTGGCCATTGGAATTGCGGAGGGACTTCAATATCTTCATCACGAATGCCCAAGACGAATCATTCACAGAGATATCAAGGCTTCCAATATTTTGATCGATGAGAATTATGAACCTCTGATTTCAGATTATGGATTGGCAAAGTGGCTGCCACAAAAGTGGGACCAACATGTTGTGTCCCCCATAGAGGGCACATTTGGGTTAGTAATAATTCTGCCACTTCATTAG 837 0.4432 MREKLRKETWWEEEESPRCVLEMTAESDRGRSSGRCRKGVMEALRMNSVKRLSAIPLFSSTYMISRKSLRKLTRMRSAEETHEHDSPTWKTFDYSDLVAATDDFCSENLVGKGGNAEVYRGRLADGRIVAVKKLMNEEKNDADQTGDFLTEIGIIGHIKHHNSCEVIGFGIENGLFLVLHYAVHGSLASLLFGSEKLEWNVRFKVAIGIAEGLQYLHHECPRRIIHRDIKASNILIDENYEPLISDYGLAKWLPQKWDQHVVSPIEGTFGLVIILPLH 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g1455 278 SMART serkin_6 104 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi10g1455 278 Gene3D Phosphorylase Kinase; domain 1 74 181 - -
Mibi10g1455 278 Gene3D Transferase(Phosphotransferase) domain 1 183 272 - -
Mibi10g1455 278 SUPERFAMILY Protein kinase-like (PK-like) 85 268 IPR011009 -
Mibi10g1455 278 FunFam Os07g0541700 protein 183 268 - -
Mibi10g1455 278 ProSitePatterns Protein kinases ATP-binding region signature. 110 133 IPR017441 GO:0005524
Mibi10g1455 278 PANTHER OS08G0249100 PROTEIN 27 271 - -
Mibi10g1455 278 ProSiteProfiles Protein kinase domain profile. 104 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi10g1455 278 Pfam Protein kinase domain 107 256 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi10g1455 278 ProSitePatterns Serine/Threonine protein kinases active-site signature. 224 236 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi10g1455 Mibi-ChrMibi10 35278637 35280077 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi10g1455 32 270 Receptor kinase-like Gene Family AT2G23950 38.843 1.37e-43 153
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Mibi10g1455 Pkinase 8.7e-28 CL0016