Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g1454 ATGCTATGCAAGTACGTACACAGGTATCTAGCTCCGGAGTATTTTATGCATGGAATTGTGGATGAAAAGACGGATGTATTTGCCTATGGGGTTTTGTTACTTGAGATAATTACAGGTCGTAGGGCTGTCGATTCTGATAGTAGGCAAAGTCTTGTGATTTGGGCAAAGACTCTACTGAACGATAAAAGCATGAAGGAACTAGCAGATCCTAGATTAGAAGATGATTATGATCCCACAGAAATGGATCGTGCCATGGTCACTGCTTCCATGTGTATACACCACTCAGCTTCCAAGCGTCCCTACATGAATCGGGTAGTGCAGATGCTGAAGGGGGAAGAAGGACCTATTGAAGTAAAGCCACAAAAATCCATGGCCCCAAGATCTCAAATGTTGGATTCATGTGATCTTGAAGATTATAGTTGTTCCAGTAACTTGAAAGATCTCAAACGTCACATGCAATTAATCTTGGAGTGA 474 0.4198 MLCKYVHRYLAPEYFMHGIVDEKTDVFAYGVLLLEIITGRRAVDSDSRQSLVIWAKTLLNDKSMKELADPRLEDDYDPTEMDRAMVTASMCIHHSASKRPYMNRVVQMLKGEEGPIEVKPQKSMAPRSQMLDSCDLEDYSCSSNLKDLKRHMQLILE 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g1454 157 SUPERFAMILY Protein kinase-like (PK-like) 8 130 IPR011009 -
Mibi10g1454 157 Gene3D Transferase(Phosphotransferase) domain 1 4 130 - -
Mibi10g1454 157 Pfam Protein tyrosine and serine/threonine kinase 6 109 IPR001245 GO:0004672|GO:0006468
Mibi10g1454 157 PANTHER OS08G0249100 PROTEIN 9 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi10g1454 Mibi-ChrMibi10 35277919 35278572 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi10g1454 9 133 Trihelix Transcription Factor Family AT5G38560 43.609 4.93e-27 103
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Mibi10g1454 PK_Tyr_Ser-Thr 5.2e-09 CL0016