Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g1453 ATGGCTCGTGCTACTAACTGGCTTTCATTTTCTTTGTCGCCCATGGAAATGCTGACGTCTACCTCCCACACTCAGTTCCTTCAATACGACGCCGTTTCTGCTGCTGCTCCTCCTCCTCCCCACTACTTCGTTGACAACTTCTATGCCAATGGATGGGCAAATCCTAAGCCTCATGTTCTGTACACTGACCATAAAGGAAGTGAAGCTGAAGAACAAAACATAGTAGTGGGATCATCATCATCATATGCCTCAGGTTTCATGGAAAATCATAACCAAGACCATCCAGTTCCAAAACTCGAGGATTTTCTTGGTGATTCATCATCATCCATTATGCGTTACTCTGATAGTCAAACGGACACTCAAGATTCATCCACCTTGACCCATATATATGACCATGGCTCTGCTTACTTCAGTGACCACCAAGATCTGAAAGCCATTACTGGGTTTCAAGCCTTTTCTACTAACTCGGGCTCTGAAGTTGATGACTCGGCCTCAATCGGTAAAACTCAGCCCGAGTTTGTGACTCACTCCATTGACTCGTCCGGCAATGAGCTGGCATTCTCTAACGCCGCCGCCGCCGCCACCGGAACTCTGTCCCTCGCCGTCACTGCCGCCGCACAATGTGGCGGCGAGCAGAAATCCACCGTTGTTCCTGTGGATTCCGATGGCTCCAAGAAAATGGCTGATACTTTTGGCCAAAGAACTTCGATTTACAGAGGGGTTACTAGACACCGATGGACGGGCAGATATGAAGCGCATCTCTGGGATAACAGCTGTAGGAGAGAGGGTCAGGCCAGAAAAGGCCGTCAAGGTGGATATGACAAAGAAGACAAGGCTGCGAGAGCTTATGATTTGGCAGCTCTAAAGTACTGGGGCCCCACTGCCACCACCAACTTCCCTGTCTCCAACTATGCAAAGGAAATGGAGGAGATGAAGCATGTGACAAAGCAAGAATTTATCGCCTCATTGCGAAGGAAAAGTAGTGGATTTTCCAGGGGAGCTTCTATATACAGGGGTGTCACAAGGCATCACCAACAAGGTAGATGGCAAGCTAGGATTGGCCGTGTTGCTGGGAACAAGGATCTGTACCTTGGAACATTTGCCACTGAAGAGGAAGCAGCTGAGGCATATGATATTGCAGCCATAAAGTTTAGAGGTGCAAATGCTGTGACCAACTTTGAGATGAGTAGATATGACGTTGACGCCATCATGAAGAGCTCTCTTCCGATCGGTGGGGCAGCGAAACGCTTGAAGCTATCGCTTGAATCCGAGCAGAAAGTAAATCTGAATAATAATAGCCAGCAAATCCAATGCACCAACATGAGCAACAGCATCAACTTCTCACCAATTCAGGCAGTTTCCTCTGTCCCTTGTGCAATTCCATTTTATCCTGCTGCTACAGCATACCATCATCACAACCTCCTGAACCATTTTCGCCCTTCTGATGCCGGCGCTGCAGAATCTGCCATATCTAATCCGTCCGTAACTCCATTTCCTTCTCTGCCTGCACCTTCTGAGTTCTTTATATGGCCTCCTCATCAGTCATATTAA 1551 0.479 MARATNWLSFSLSPMEMLTSTSHTQFLQYDAVSAAAPPPPHYFVDNFYANGWANPKPHVLYTDHKGSEAEEQNIVVGSSSSYASGFMENHNQDHPVPKLEDFLGDSSSSIMRYSDSQTDTQDSSTLTHIYDHGSAYFSDHQDLKAITGFQAFSTNSGSEVDDSASIGKTQPEFVTHSIDSSGNELAFSNAAAAATGTLSLAVTAAAQCGGEQKSTVVPVDSDGSKKMADTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQARKGRQGGYDKEDKAARAYDLAALKYWGPTATTNFPVSNYAKEMEEMKHVTKQEFIASLRRKSSGFSRGASIYRGVTRHHQQGRWQARIGRVAGNKDLYLGTFATEEEAAEAYDIAAIKFRGANAVTNFEMSRYDVDAIMKSSLPIGGAAKRLKLSLESEQKVNLNNNSQQIQCTNMSNSINFSPIQAVSSVPCAIPFYPAATAYHHHNLLNHFRPSDAGAAESAISNPSVTPFPSLPAPSEFFIWPPHQSY 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g1453 516 PRINTS Ethylene responsive element binding protein signature 376 396 IPR001471 GO:0003700|GO:0006355
Mibi10g1453 516 PRINTS Ethylene responsive element binding protein signature 238 249 IPR001471 GO:0003700|GO:0006355
Mibi10g1453 516 ProSiteProfiles AP2/ERF domain profile. 237 300 IPR001471 GO:0003700|GO:0006355
Mibi10g1453 516 CDD AP2 335 396 IPR001471 GO:0003700|GO:0006355
Mibi10g1453 516 CDD AP2 236 302 IPR001471 GO:0003700|GO:0006355
Mibi10g1453 516 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 90 434 - -
Mibi10g1453 516 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 51 140 IPR029055 -
Mibi10g1453 516 SUPERFAMILY DNA-binding domain 335 396 IPR016177 GO:0003677
Mibi10g1453 516 SUPERFAMILY DNA-binding domain 236 302 IPR016177 GO:0003677
Mibi10g1453 516 FunFam AP2-like ethylene-responsive transcription factor ANT 236 302 - -
Mibi10g1453 516 Gene3D AP2/ERF domain 336 396 IPR036955 GO:0003700|GO:0006355
Mibi10g1453 516 Gene3D AP2/ERF domain 237 302 IPR036955 GO:0003700|GO:0006355
Mibi10g1453 516 FunFam AP2-like ethylene-responsive transcription factor 335 396 - -
Mibi10g1453 516 SMART rav1_2 237 306 IPR001471 GO:0003700|GO:0006355
Mibi10g1453 516 SMART rav1_2 336 400 IPR001471 GO:0003700|GO:0006355
Mibi10g1453 516 Pfam AP2 domain 237 292 IPR001471 GO:0003700|GO:0006355
Mibi10g1453 516 Pfam AP2 domain 336 386 IPR001471 GO:0003700|GO:0006355
Mibi10g1453 516 ProSiteProfiles AP2/ERF domain profile. 336 394 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi10g1453 Mibi-ChrMibi10 35273070 35277139 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi10g1453 52 516 AP2-EREBP Transcription Factor Family AT5G10510 56.307 1.16e-167 483
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Mibi10g1453 AP2 1.2e-08 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi12g0986 12 24589031 24593500 Mibi10g1453 10 35273070 35277139 CCT