Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g1436 ATGCAGATTCAAAATTACTATAACCTGGGAGTACACAGGTTACGCAGCAGCTTTTCTCAAGGAACTATCTCGGAGACATACAGAAACTCGTTCTTGAAACCAAAATCAAAGGCAGAGATCAAAATACTCGCTGCTAAGAAACACAGTGATGCAGAAAGGAGACGCAGGATGCGAATCAATGCTCAATATGCTGAACTTCGTACCATCCTCCCCAAGTTGGACAAAATGGACAAGGCATCGGTATTGGGGGAGACTATAAGGCAAGTAAAGGAGATGAAGAAGAATATATCAGAATGGGAAGCAGCTAGTGCAAGTAGTTCTGGTGAGAACACTGTGTTTCCCAATGCAGTAGACAAGTTGAATGTGGAACACTGTAAAAATGAGGAGGGCCTCATGAAGGCGACCCTGAATTGTGAGGATAGGCCAGACTTGATGTCAGACATCACTAGGGCTCTCAGGTCTGTGAAAGCTGAGTTGGTAAAGGCTGAGATGGTGAATGTAGGAGGGAGAGCCAGAAACGTGTTATGGGTTCAAGGCTTGGAAAATGGAAATGAAGGGTTGGTTGTCCTCAAGAGGGTTCTGAAGGTTGTCATGCACAAGCAAACCTTCAAGTTGCATCGTCTGACTCAGTAA 633 0.4487 MQIQNYYNLGVHRLRSSFSQGTISETYRNSFLKPKSKAEIKILAAKKHSDAERRRRMRINAQYAELRTILPKLDKMDKASVLGETIRQVKEMKKNISEWEAASASSSGENTVFPNAVDKLNVEHCKNEEGLMKATLNCEDRPDLMSDITRALRSVKAELVKAEMVNVGGRARNVLWVQGLENGNEGLVVLKRVLKVVMHKQTFKLHRLTQ 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g1436 210 Pfam Helix-loop-helix DNA-binding domain 46 92 IPR011598 GO:0046983
Mibi10g1436 210 SUPERFAMILY ACT-like 135 182 IPR045865 -
Mibi10g1436 210 CDD ACT_UUR-ACR-like 135 182 - -
Mibi10g1436 210 SMART finulus 49 98 IPR011598 GO:0046983
Mibi10g1436 210 Coils Coil 82 102 - -
Mibi10g1436 210 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 36 100 IPR036638 GO:0046983
Mibi10g1436 210 Gene3D - 43 102 IPR036638 GO:0046983
Mibi10g1436 210 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 43 92 IPR011598 GO:0046983
Mibi10g1436 210 PANTHER TRANSCRIPTION FACTOR BHLH30 33 201 IPR045847 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi10g1436 Mibi-ChrMibi10 35115452 35116494 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi10g1436 42 177 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G68810 43.262 2.15e-25 99.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mibi10g1436 HLH 2.1e-09 No_clan