Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g1423 ATGGATTTTGAGGAGGATCAAGAGGAACAAGAAGAAGAAATAGGCATGGAGTCTTTAGGGATATCATCATCTCCAAGGGTAAAAATCCCCAACTCCGCCGGCACAGGGGAAGCCACGGTGTTCCCTCAACCCACAAGAAATTACTACAACAACAACAACAACAACAAGGGAAGGTACAGAGAATGCCTGAAAAACCACGCCGTCGGCCTCGGTGGCCACGCCCTTGACGGTTGCGGCGAATTCATGCCGGCCGGAGCCGACGGCACACTCGAATCCCTCAAATGCGCCGCCTGTAACTGCCACCGTAACTTCCACCGCAAAGAGGCGGCCGAACCCTTCCTACTGACCCCACATTACCACCACCCGCCTCCGGCGCCGGCGCCGGCGCCATTCACGGCGGCGTATTACCGGGGGCCATCGGGGTACTTACACGTGGCGGGGCAGCGGCCAGGGACCTTGGCTCTGCCGTCGACGTCCGGGGGAGGCGGCGGTGGGACCCAGAGCACAAGGGATGAGATGGAGGATGATGTTTCAAATCCGGGTGACAATTACAGAGGAGGGTCGACATCTTCGGGGAAGAAGAGGTTTAGGACGAAGTTCACGCAGGAACAGAAGGATAAGATGTTGGAGCTTGCGGAGAGATTGGGATGGAGGATTCAGAAGCAGGATGAGGAGTTGGTGCAGCAATTCTGTAATGAGGTGGGAGTGAAGCGTCAGGTTCTTAAGGTTTGGATGCACAACAACAAACACACTGTGGGTAAGAAGCCCTAG 771 0.5603 MDFEEDQEEQEEEIGMESLGISSSPRVKIPNSAGTGEATVFPQPTRNYYNNNNNNKGRYRECLKNHAVGLGGHALDGCGEFMPAGADGTLESLKCAACNCHRNFHRKEAAEPFLLTPHYHHPPPAPAPAPFTAAYYRGPSGYLHVAGQRPGTLALPSTSGGGGGGTQSTRDEMEDDVSNPGDNYRGGSTSSGKKRFRTKFTQEQKDKMLELAERLGWRIQKQDEELVQQFCNEVGVKRQVLKVWMHNNKHTVGKKP 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g1423 256 FunFam Zinc-finger homeodomain protein 2 182 254 - -
Mibi10g1423 256 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 59 108 IPR006456 -
Mibi10g1423 256 Gene3D - 180 253 - -
Mibi10g1423 256 TIGRFAM ZF_HD_prot_N: ZF-HD homeobox protein Cys/His-rich dimerization domain 58 108 IPR006456 -
Mibi10g1423 256 MobiDBLite consensus disorder prediction 152 166 - -
Mibi10g1423 256 MobiDBLite consensus disorder prediction 24 52 - -
Mibi10g1423 256 Pfam ZF-HD protein dimerisation region 58 109 IPR006456 -
Mibi10g1423 256 MobiDBLite consensus disorder prediction 1 52 - -
Mibi10g1423 256 MobiDBLite consensus disorder prediction 1 15 - -
Mibi10g1423 256 SUPERFAMILY Homeodomain-like 182 254 IPR009057 -
Mibi10g1423 256 TIGRFAM homeo_ZF_HD: homeobox domain, ZF-HD class 193 249 IPR006455 -
Mibi10g1423 256 MobiDBLite consensus disorder prediction 151 195 - -
Mibi10g1423 256 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 47 251 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi10g1423 Mibi-ChrMibi10 34976514 34977284 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi10g1423 56 252 ZF-HD Transcription Factor Family AT4G24660 52.000 5.61e-63 195
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Mibi10g1423 ZF-HD_dimer 8e-29 No_clan