Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g1411 ATGGCTCTGCTTCTAGGTGGTGTTCAACCCCAAATACTAACTTCCTTTCCTCATGATCATACAAAATCTTCCATCACAGTTTCTCGTAGACGCTTCCATTTCACTGTTAACACTAGAATTCACAATGCTCTGTCCAGTCCTTCTTTTAATCGGAGACGCATACTTGTTTGTCCTCCAAAATCAGCGTCCATAGATGGGTTTTCTGTCCAGAAGAATACAGAAGATTTGAGGGAAGAAAAAGAAGGAGAAGAAGAAGAAGAAAAAGAAGAGTTTTTTAAGAGGCTTAAGAGATGGTTCAGCTTCCTTCCTTCGATTTTGCCTGGTGGAAGCTGGTGGGACTTCTCAGAAAACGTGGAAATTCAAGATTCAGCTAAACCCGTCACTGTGTGGCGTGCGCTTGCCAAAATGTGGGAACTTGTTGCTCAAGATCGATGGATCATTTTCGCTGCATTCACTGCTCTGATTCTTGCTGCTGTTTCGGAGATTTCCATACCACATTTCTTAACAGCGTCTATATTCTCCGCACAGGGTGCGGATGTTCCTGTTTTCCGTCGCAATGTGCTTCTCTTGGTTTTGTTCTGTATTACTTCGGGAATATGCAGTGGGATACGAGGCTGCTTTTTTGGAATTGCAAATATGATACTGGTAAAGAGAATGAGAGAAACATTGTACTCCTCCCTTCTTCTTCAGGATATATCATTTTTTGACAATGCAACAGTTGGTGATCTGACAAGTAGGCTTGGTGCTGATTGCCAACAAGTTTCACGTGTTATTGGAAATGATCTTAACTTGATATTGCGCAATGTTCTTCAGGGAACAGGTGCATTAACCTACTTGTTATTTTTGTCTTGGCCACTTGGTTTGTTTACATTGATGATATGCTCCATATTATCAGCAGTCTTGCTACTTTATGGAAGGTACCAGAAAAAGGCTGCAAAGTTGATCCAAGAAGTCACTGCTTCTGCCAATGAAGTTGCACAAGAGACATTTTCTCTTATTAGAACTGTCCGTGTTTATGGAACAGAAGAGGAAGAACTTGGAAGGTACAAACGGTGGCTGGAAAAGCTAGCTGATATAAGCTTGAGACAAAGTGCTGCATATGGATTTTGGAACTTCAGCTTCAATAATCTTTATCACTCAACTCAGGTTATCGCCGTGCTGTTTGGAGGAATGTCTATTCTAGCTGGTCATATTACAGCAGAGAAACTTACTAAGTTTATACTATACAGTGAATGGCTTATTTATTCAACCTGGTGGGTGGGAGACAGTATATCATCTTTGATGCAATCTGTTGGGGCTAGCGAAAAAGTATTCCAATTGATGGATCTCTTACCTAGCAGCCAGTTCCATACAAAAGGAATAAAGCTGCAGAGGTTAATTGGGAATATTGAATTTATAAATGTATCTTTTCACTATCCTTCAAGGCCCATGGTATCTGTAGTGCAGCATATAAATTTTGCTGTTCGACCTGGTGAGGTGGTTGCAATAGCTGGTCTTAGTGGCAGTGGAAAAAGTACACTGGTGAACCTTCTGCTCCGCCTATATGAGCCAACTAACGGTCAGATTTTGATTGATGGCGCCCCTCTTAAAGATTTGGATATCATGTGGTGGAGAGAAAGAATTGGATTTGTTGGACAGGAACCTAAGCTCTTCAGAATGGATATTAGTTCAAACATAAGATATGGATGCACTCGAGACATTAAGCAAGAGGATGTTGAATGGGCTGCAGAGCAAGCATATGCCCATGACTTCATCTCAGCACTTCCTAATGGCTACGAAACACTGGTTGATGATGATTTGTTAAGTGGGGGACAAAAGCAGCGAATTGCTATTGCTAGAGCTATTCTTAGGGATCCAAAAATATTGATCCTTGATGAAGCCACTAGTGCACTGGATGCTGAGAGTGAACATAATGTCAAGGGTGTTCTTCGTGCTGTTAAAAATGACTCCCTAAGCATGAGAAGTGTTATTGTGATTGCACACAGGCTTTCTACCATACAAGCAGCAGACAGGATTGTGGCAATGGAGAGCGGTAGAATCGTTGAGATTGGGAGTCACAGTGAACTTCTCTTAAGAGATGGTCTATATGCACGATTGATCAGTAAACAAGCTGACGCACGAAACCAAGTGGTTTCATCAAGGACATATTTGCATCTTGCTGCTGCTGCTGATGATGATGATGATGTTTTTGGATTGGAGAATTTGACAGAAGCAGGGTTCCATCGCATATATAAGCTAACGTATAAAAAAGTGTTATAG 2259 0.4135 MALLLGGVQPQILTSFPHDHTKSSITVSRRRFHFTVNTRIHNALSSPSFNRRRILVCPPKSASIDGFSVQKNTEDLREEKEGEEEEEKEEFFKRLKRWFSFLPSILPGGSWWDFSENVEIQDSAKPVTVWRALAKMWELVAQDRWIIFAAFTALILAAVSEISIPHFLTASIFSAQGADVPVFRRNVLLLVLFCITSGICSGIRGCFFGIANMILVKRMRETLYSSLLLQDISFFDNATVGDLTSRLGADCQQVSRVIGNDLNLILRNVLQGTGALTYLLFLSWPLGLFTLMICSILSAVLLLYGRYQKKAAKLIQEVTASANEVAQETFSLIRTVRVYGTEEEELGRYKRWLEKLADISLRQSAAYGFWNFSFNNLYHSTQVIAVLFGGMSILAGHITAEKLTKFILYSEWLIYSTWWVGDSISSLMQSVGASEKVFQLMDLLPSSQFHTKGIKLQRLIGNIEFINVSFHYPSRPMVSVVQHINFAVRPGEVVAIAGLSGSGKSTLVNLLLRLYEPTNGQILIDGAPLKDLDIMWWRERIGFVGQEPKLFRMDISSNIRYGCTRDIKQEDVEWAAEQAYAHDFISALPNGYETLVDDDLLSGGQKQRIAIARAILRDPKILILDEATSALDAESEHNVKGVLRAVKNDSLSMRSVIVIAHRLSTIQAADRIVAMESGRIVEIGSHSELLLRDGLYARLISKQADARNQVVSSRTYLHLAAAADDDDDVFGLENLTEAGFHRIYKLTYKKVL 752
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g1411 752 FunFam Multidrug ABC transporter ATP-binding protein 455 707 - -
Mibi10g1411 752 Gene3D - 453 704 IPR027417 -
Mibi10g1411 752 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 463 702 IPR003439 GO:0005524
Mibi10g1411 752 SMART AAA_5 490 679 IPR003593 -
Mibi10g1411 752 CDD ABC_6TM_TAP 150 437 - -
Mibi10g1411 752 Coils Coil 70 90 - -
Mibi10g1411 752 SUPERFAMILY ABC transporter transmembrane region 136 445 IPR036640 GO:0005524|GO:0016020
Mibi10g1411 752 PANTHER ABC TRANSPORTER B FAMILY 99 701 - -
Mibi10g1411 752 FunFam ABC transporter B family member 26, chloroplastic 129 448 - -
Mibi10g1411 752 Pfam ABC transporter 482 629 IPR003439 GO:0005524
Mibi10g1411 752 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 148 429 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mibi10g1411 752 ProSitePatterns ABC transporters family signature. 601 615 IPR017871 GO:0005524|GO:0016887
Mibi10g1411 752 Pfam ABC transporter transmembrane region 148 414 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mibi10g1411 752 Gene3D ABC transporter type 1, transmembrane domain 303 710 IPR036640 GO:0005524|GO:0016020
Mibi10g1411 752 Gene3D ABC transporter type 1, transmembrane domain 114 299 IPR036640 GO:0005524|GO:0016020
Mibi10g1411 752 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 454 703 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi10g1411 Mibi-ChrMibi10 34806711 34812818 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi10g1411 218 713 Calmodulin-binding Proteins AT2G36910 33.267 1.89e-71 252