Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g1402 ATGGCTTCCTGTAGTCTCCTTCCTTCTCTAACTCATATCTCTCTGCTGGCTACTCTACTTGTTACAGTTTTTTCCTTTCAAACTTCCATCAGAGTATCTTATATGGCCCCTTTTAAATGCTCTGCAAAAGTCATCACATGTAATGCCTTACTTTACCACATAAACCATGGTCTTGCCATAGAAGAAATAGCCTCTCTTTACTCTGTTAATTCATCCCAAATACAACCAATAACGCATGGCACCAACCAAGACTACCTCATAACTGTTCCTTGTTCTTGTAAAATAGCCACTAACCTTAGGGGATATTTCTATGACACAACACACACAGTGGAGCAAAACGATACATTTAGTAATATTTCAGATTTCTATTACAGTGGACAAGCCTTTTCTCCTACTGATAATTTGACCACAGGTGAGAACTTAACAATACATCTTCCCTGTGGATGTTCAGAAAGTGATTCTCAAATCATTGTGACATATACAGTCCAGCAGAGTGATACGGTAGCAGAAATCGCGAATCTGTTATCAGCTACACCTACTGGCATTCAGAACATGAATGAAGTTTTAGCTAATGGGGCTTCATTCATAGATGTGGGTTGGGTGTTATATGTGCCTAAGGAGCTCAATGGGAATCCATCCTCAAAAGGAAGCGGAAAGGAACTCAAGCATTCTATTATCATTGGTGTCTTAGTGGGTGTGGCATCACTTTCTTTCATCACAATACTCATTGTCATTCTGTGGAGAAAAAAGGTCACTGAAACCAACAAAGAAGATACAAAAGTTGTCTCAAAAAGATCAACTTCAAAAGCATTATCTAAGAGGTCTATTTCCAATAGAACTGATCTTTCCTTAAAGAACCATCAACTTCATATAGAAACTATAGAAGAAGTAACATCAATTGACTCAGATAGACCAGTAACATTTTATCTTGAGGAGATTGTGGAGGCCATAAACAAAGAAAGCAAAATAATAGGAAAGGGCGGATATGGGACTGTGTATTTTGGAATTCTAGGAGATAAGGAGGTTGCCATTAAAGAAATGAGGTCCAATAAATCCAAAGAGTTCTATGCTGAACTAAAGGTCTTATGCAGAATCCATCACATCAACATTGTGGAGCTATTGGGATATGCCAGTGGAGAAGATAACCTCTATTTGGTTTATGAGTATGTTTCAAAAGGATCTCTCAGTGACCATCTTCACAATCCATTTCTAAAAGGTCATGAACCTCTTTCATGGACTGCTAGAGCACAGATTGCTCTAGATGCTGCAAAAGGACTTGAATACATACACGATTACACGAAAGCACGGCATGTGCACCGAGATATCAAGACTAGCAATATTCTTCTCGACAATAAACTCAGAGCCAAGATTGCAGATTTTGGACTAGTAAAGCTGTTAGAACGAACAAATGATGATGAATTTATAGCAACAAGGCTTGTTGGAACACCAGGCTACCTTCCACCTGAATCTGTGAAGGAGCTCCAGGTGACCTCAAAAACCGATGTTTTCGCATTTGGAGTAGTTCTAGCAGAGCTAGTAACAGGGAGACCTGCTCTGTTTCGTGACAGCCAAGAAACCCCCAGAATGAGATCGCTTATTTCTGTTATTAATAAAGTATTTGAAGCTGATGACCCAGTGAGTGCTTTAGAGGATATCATAGACAAAAACCTTCGGGATAGCTATCCTGTGGAGGATGTCTTTAAGATGGTAGAGATAGCAGAAAGATGCTTACGTGAAGAGCCAGTAGAGAGGCCAGAAATGAGGGAGATTGTGGGCACATTGTCACATATTTTGATGTCATCCATAGAGTGGGAAGCCTCATTAGGTGGAAACAGTGAAGTCTTTAGTGGCATATTTTCTGGAAGATGA 1869 0.3965 MASCSLLPSLTHISLLATLLVTVFSFQTSIRVSYMAPFKCSAKVITCNALLYHINHGLAIEEIASLYSVNSSQIQPITHGTNQDYLITVPCSCKIATNLRGYFYDTTHTVEQNDTFSNISDFYYSGQAFSPTDNLTTGENLTIHLPCGCSESDSQIIVTYTVQQSDTVAEIANLLSATPTGIQNMNEVLANGASFIDVGWVLYVPKELNGNPSSKGSGKELKHSIIIGVLVGVASLSFITILIVILWRKKVTETNKEDTKVVSKRSTSKALSKRSISNRTDLSLKNHQLHIETIEEVTSIDSDRPVTFYLEEIVEAINKESKIIGKGGYGTVYFGILGDKEVAIKEMRSNKSKEFYAELKVLCRIHHINIVELLGYASGEDNLYLVYEYVSKGSLSDHLHNPFLKGHEPLSWTARAQIALDAAKGLEYIHDYTKARHVHRDIKTSNILLDNKLRAKIADFGLVKLLERTNDDEFIATRLVGTPGYLPPESVKELQVTSKTDVFAFGVVLAELVTGRPALFRDSQETPRMRSLISVINKVFEADDPVSALEDIIDKNLRDSYPVEDVFKMVEIAERCLREEPVERPEMREIVGTLSHILMSSIEWEASLGGNSEVFSGIFSGR 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g1402 622 SUPERFAMILY LysM domain 158 205 IPR036779 -
Mibi10g1402 622 ProSiteProfiles Protein kinase domain profile. 318 599 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi10g1402 622 FunFam PTI1-like tyrosine-protein kinase 3 390 608 - -
Mibi10g1402 622 Gene3D Transferase(Phosphotransferase) domain 1 390 607 - -
Mibi10g1402 622 Gene3D LysM domain 149 213 IPR036779 -
Mibi10g1402 622 ProSitePatterns Protein kinases ATP-binding region signature. 324 345 IPR017441 GO:0005524
Mibi10g1402 622 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 23 616 IPR044812 GO:0019199|GO:0045087
Mibi10g1402 622 Pfam Protein kinase domain 320 591 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi10g1402 622 SUPERFAMILY Protein kinase-like (PK-like) 308 594 IPR011009 -
Mibi10g1402 622 ProSiteProfiles LysM domain profile. 158 204 IPR018392 -
Mibi10g1402 622 SMART serkin_6 318 599 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi10g1402 622 Pfam LysM domain 160 205 IPR018392 -
Mibi10g1402 622 Gene3D Phosphorylase Kinase; domain 1 290 389 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi10g1402 Mibi-ChrMibi10 34726643 34730181 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi10g1402 37 622 Receptor kinase-like Gene Family AT1G51940 36.991 1.64e-122 375
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Mibi10g1402 Pkinase 2.8e-50 CL0016