Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g1394 ATGTCTGGATCACCCCTTGTGCTTCTTCTTCTTCTTCGCTTCGCGATTCCTTCTCTTTCTGATCCACGAACCACAGAAGCAGCCCTTATGTGTACAAACAGAACAACACCATTCACAGAACGCAATGTCTTCACAGACAATTTCTTAGCTGCGTTAGATTCCTTAACCCCTTCAATTGCTTGGCAAAGACACGCCTTTTCTATTAATGGCACTGGAAATTCCATTGTTTATGCTTTCGCACAGTGCATGGACGATCTCACTGAATGGGATTGCAATATTTGCTTCGCTCAGATCAAAACTCAAGTCCCAAGGTGTTTACCATTTCAGAGAGGAACTCGTGGGGGAAGGGTGTTCTTTGATGGGTGTTACCTTAGGTACGATGATTACAATTTCTTCAATGAAAGTCTCAGTGAACAAGACAGGACTGTGTGTGGGAGAAAAGATTTTGGTGGGAATCAGAGTGTTTATGAGGCTAATACAATGGATTTGGTGAGGAATTTGAGTGTGGAAGCAGCTAAGAATGATGGGTTCTTTGTGGGTTTTGTGAGAAAAAGTAACGTGACTGTTTATGGGTTGGCTCAGTGCTGGGAATTAGTCAATGGAAGTGCTTGTGAGAGATGTTTGGCAGAAGCTGTTAATAATATTCGTTCTTGTACCCCAAAAGAAGAAGGAAGAGTTTTGAATGCTGGATGTTATATGAGGTATTCTACCCAAAAGTTCTATGACAACACAACCAGTCCCCTTAGAAGAAATCAAGGTAGCAGCAGCAGTTCAACTTTAATGTTGGCTGCATCAAGTGCTGGAACAGCTCTTGTACTGGTTGTTGCAGTTGTTGCTTTCTTTGTAAGGAAGAGGATGCTGAGGAAGAAGAGAGAAAGAAGACAGTTTGGTGCACTTTTGGACAGAGTTTACAAGTCCAAGCTCAATATGACATATGAAGTTCTCGAAAGGGCCACAAATTACTTCAATGCCTCCAATAAGCTTGGTCAAGGAGGTTCTGGTTCTGTTTACAAAGGAGTTCTGCCTGATGGGAATATTGTAGCGATAAAAAGGCTTAGCTTTCACACAACGCAATGGGCAGAACATTTCTTCAATGAGGTTAATCTGATAAGTGGAATTCATCATAAAAATCTTGTAAGGCTTCTTGGTTGCAGCATTACAGGACCGGAAAGCCTTCTTGTTTATGAATACGTGCCAAACCAAAGCGTTCATGATCACTTTTCGGTGAAGCAGAAATCTCAACCCTTGACTTGGGAAGCAAGGCGTAAAATCATATTGGGAACTGCAGAGGGATTGTCCTATCTTCACGAGGAATCGCCAGTGAGAATTATTCATAGAGATATAAAACTAAGCAATATCATGCTTGAAAAGGATTTCACACCCAAGATAGCTGATTTCGGACTTGCTAGATTATTTCCAGAAGATGGGACTCACATTAGCACTACTGTTGCTGGCACACTTGGTTATATGGCTCCAGAATATGTGGTTCAAGGAAAATTATCAGAGAAAGCAGATATTTACAGTTTTGGAGTTCTTCTCATTGAAATCATATCAGGAAAAAGGAGTAGTTCATTTGTTCTAAATTCATCCTCCATCCTACAAGTGGTTTGGAATCTTCATAGGTCAAGCAGGTTATGTAACATGGTAGATCCAAGACTTGAAGGCAATTATCCGGCTGAGGAAGCATGTCGGCTACTTCAGATAGGCTTGCTTTGCGCACAAGCTTCATCAAATCTACGACCATCTATGTCAGAAGTTGTGAGAATGATCACTAGCAATGAGGAAATAGCTCAGCCAACACAACCACCATTTATGGTAGCGAGCAGCGTAGAATGCAGCAAATCTGAATATAATTTTCATACTTCATCCAAAACACATTCTTCAGAGGACAGTATGACTGAAAGCCTTATTCCTCCTAGATGCCTTCTTCTTCACTTCCCACATACTACATCAATTTCTCAACTTCATTGCCTCATCTTGAATTCACATATCACTCAAAGAGAAACTTCAACTCAATTCTGGGTCTCAATGCAAATCACAGTCCAGAAATCTGTATTAGAGAACATGAAGAAGAAAGCAGTCCAATTAGTCACTTGTCAGTCCCTTATTCTCCTTCTAATCAAATCATTACTAACAGAGATAGTAGTGGCAGATCCAAGAACCAAGACAGTGCAATTAATGTGTGGCAGCCAATCAGAGCACAATATCACAAACTTTGTCACAAATTTTGTTACAACAATGGATGATATCAGTGATCAGATGCGTGATCATGGCTATGGCACAGCAGTTTCAGGGACAGGTCCTGACACTAACTATGGCCTTGCTCAGTGCTATGGAGATCTTTCCTTACTTGACTGTGTACTATGTTATGCCGAGGCACGTACGGTTCTCCCAAAGTGCTTCCCCAGTAATAGTGGTCGCATATATCTTGATGGTTGCTTTATGAGGGCTGAGAATTACAGCTTCTTTGATGAGTACAGAGGAGCAGAAGACAAGGCTGTGTGTGGAAACACAACCAGGAAAAGCTCGAGTTTTCGAACGACAGTAAAGCAGGTGGTTCTGAGTGCAGTTGAAGCTGCAACAAATAATAAAGGGTACGCTAGGGAGAGTGTTACTGTATCAGGAACAACAAATGAGTCAGCTCATGTTCTGGCTAATTGTTGGAAAAGTTTGAACACAAGCTCTTGTAAAGCTTGTCTTGAAGATGCATCCTCGTCTATATTGGGATGCTTGCCCTCCTCAGAAGGAAGAGTTCTGAAAACCGGCTGCTTCATGAGGTATTCAGACAAAGATTTTCTGAACAAGGAACTGGAAAGACAAAGTTCAGCAGGCAATGTAATAGTTCTAGTGGTTGTAATTGTCAGTTCAGTTATTGTTTTCGTGGTTGCAATAGCCATTGGAGTTTATGTCTGGAAGCAGAGGTACATTCAAATGAAACGAAGAGGTTCAAATGATGTGGAGAAATTAGCAAAATCCCTTCACCACAACAGCTTGAACTTCAAGTACTCCACCCTGGAGAGGGCAACCGACTCTTTTGATGAGGCGAACAAGCTTGGACAAGGAGGGTTTGGGACAGTTTACAAAGGAATTTTGCCTGATGGCAGAGAGATTGCAGTCAAGAGGCTATATTTTAACAACAGACATAGAGCAGAAGATTTCTATAATGAAGTCAACATAATCAGCAGTGTGGAACACAAAAATCTAGTCAGATTGTTAGGATGCAGTTGTTCGGGACCTGAAAGCCTTCTTGTGTATGAGTATCTACCCAACAAGAGTCTTGATCGTTTCATTTTTGATAAAAACAGAGGCAAGGAACTAAATTGGGATAGGAGATATGACATCATCGTTGGGACTGCAGAAGCATTAGTCTACCTGCATGAGAAGTCCAAGATTAAGATAATTCACAGAGATATAAAAGCCAGCAATATCTTATTGGACACAAGGCTTCGAGCTAAAATTGCAGATTTTGGTTTAGCTAGATCTTTCCAAGAAGACAAAAGCCACATCAGTACAGCTATTGCAGGAACTTTAGGGTATATGGCTCCAGAGTACCTAGCCCATGGTCAGTTAACAGAGAAAGCAGATGTATATAGTTTTGGTGTGCTGCTACTGGAAATAGTTACCGGGAGACTGAACAACAGAAGCAAAGCATCAGAATATTCAGACAGCCTAATCACAGTGACATGGAAGCATTTCCAGTCAGGGACGACAGAACAACTATTCGATCCGAATCTAACATCACATGAAAGCCACAATAGCAAGGTCACAGATGACATGTTAAGAGTGGTGCACATAGGACTTCTATGCACTCAAGAGATCCCTTCATTGCGACCAACAATGGCAAAAGCATTAGAGATGCTAACTAAGAAGGAGGAGCAACTTCCTGCTCCCTCTAATCCACCCTTCATAGATGAAAGCACAATGGCACTCCTAGACATGTATGATGATCCACTCTATCCTCTCAATGCAGTAGATTCAGTAGCTACTATGTCGCACAGCGAATTTTATCCCAGGTGA 4017 0.4152 MSGSPLVLLLLLRFAIPSLSDPRTTEAALMCTNRTTPFTERNVFTDNFLAALDSLTPSIAWQRHAFSINGTGNSIVYAFAQCMDDLTEWDCNICFAQIKTQVPRCLPFQRGTRGGRVFFDGCYLRYDDYNFFNESLSEQDRTVCGRKDFGGNQSVYEANTMDLVRNLSVEAAKNDGFFVGFVRKSNVTVYGLAQCWELVNGSACERCLAEAVNNIRSCTPKEEGRVLNAGCYMRYSTQKFYDNTTSPLRRNQGSSSSSTLMLAASSAGTALVLVVAVVAFFVRKRMLRKKRERRQFGALLDRVYKSKLNMTYEVLERATNYFNASNKLGQGGSGSVYKGVLPDGNIVAIKRLSFHTTQWAEHFFNEVNLISGIHHKNLVRLLGCSITGPESLLVYEYVPNQSVHDHFSVKQKSQPLTWEARRKIILGTAEGLSYLHEESPVRIIHRDIKLSNIMLEKDFTPKIADFGLARLFPEDGTHISTTVAGTLGYMAPEYVVQGKLSEKADIYSFGVLLIEIISGKRSSSFVLNSSSILQVVWNLHRSSRLCNMVDPRLEGNYPAEEACRLLQIGLLCAQASSNLRPSMSEVVRMITSNEEIAQPTQPPFMVASSVECSKSEYNFHTSSKTHSSEDSMTESLIPPRCLLLHFPHTTSISQLHCLILNSHITQRETSTQFWVSMQITVQKSVLENMKKKAVQLVTCQSLILLLIKSLLTEIVVADPRTKTVQLMCGSQSEHNITNFVTNFVTTMDDISDQMRDHGYGTAVSGTGPDTNYGLAQCYGDLSLLDCVLCYAEARTVLPKCFPSNSGRIYLDGCFMRAENYSFFDEYRGAEDKAVCGNTTRKSSSFRTTVKQVVLSAVEAATNNKGYARESVTVSGTTNESAHVLANCWKSLNTSSCKACLEDASSSILGCLPSSEGRVLKTGCFMRYSDKDFLNKELERQSSAGNVIVLVVVIVSSVIVFVVAIAIGVYVWKQRYIQMKRRGSNDVEKLAKSLHHNSLNFKYSTLERATDSFDEANKLGQGGFGTVYKGILPDGREIAVKRLYFNNRHRAEDFYNEVNIISSVEHKNLVRLLGCSCSGPESLLVYEYLPNKSLDRFIFDKNRGKELNWDRRYDIIVGTAEALVYLHEKSKIKIIHRDIKASNILLDTRLRAKIADFGLARSFQEDKSHISTAIAGTLGYMAPEYLAHGQLTEKADVYSFGVLLLEIVTGRLNNRSKASEYSDSLITVTWKHFQSGTTEQLFDPNLTSHESHNSKVTDDMLRVVHIGLLCTQEIPSLRPTMAKALEMLTKKEEQLPAPSNPPFIDESTMALLDMYDDPLYPLNAVDSVATMSHSEFYPR 1338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g1394 1338 FunFam Cysteine-rich receptor-like protein kinase 2 721 822 - -
Mibi10g1394 1338 SUPERFAMILY Protein kinase-like (PK-like) 307 613 IPR011009 -
Mibi10g1394 1338 Pfam Salt stress response/antifungal 835 929 IPR002902 -
Mibi10g1394 1338 Pfam Salt stress response/antifungal 151 237 IPR002902 -
Mibi10g1394 1338 Pfam Salt stress response/antifungal 728 820 IPR002902 -
Mibi10g1394 1338 Pfam Salt stress response/antifungal 31 129 IPR002902 -
Mibi10g1394 1338 FunFam Cysteine-rich receptor-like protein kinase 3 140 240 - -
Mibi10g1394 1338 CDD STKc_IRAK 328 591 - -
Mibi10g1394 1338 Pfam Protein kinase domain 1013 1284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi10g1394 1338 Pfam Protein kinase domain 323 588 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi10g1394 1338 FunFam Putative DUF26-domain receptor-like protein kinase family protein 975 1087 - -
Mibi10g1394 1338 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1133 1145 IPR008271 GO:0004672|GO:0006468
Mibi10g1394 1338 FunFam Cysteine-rich receptor-like protein kinase 2 288 397 - -
Mibi10g1394 1338 ProSitePatterns Protein kinases ATP-binding region signature. 328 350 IPR017441 GO:0005524
Mibi10g1394 1338 Gene3D - 25 131 IPR038408 -
Mibi10g1394 1338 Gene3D - 831 932 IPR038408 -
Mibi10g1394 1338 Gene3D - 140 240 IPR038408 -
Mibi10g1394 1338 Gene3D - 720 822 IPR038408 -
Mibi10g1394 1338 SMART serkin_6 322 592 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi10g1394 1338 SMART serkin_6 1012 1294 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi10g1394 1338 FunFam Cysteine-rich receptor-like protein kinase 2 398 598 - -
Mibi10g1394 1338 Gene3D Transferase(Phosphotransferase) domain 1 398 603 - -
Mibi10g1394 1338 Gene3D Transferase(Phosphotransferase) domain 1 1088 1298 - -
Mibi10g1394 1338 ProSiteProfiles Gnk2-homologous domain profile. 721 822 IPR002902 -
Mibi10g1394 1338 ProSiteProfiles Gnk2-homologous domain profile. 827 932 IPR002902 -
Mibi10g1394 1338 SUPERFAMILY Protein kinase-like (PK-like) 995 1314 IPR011009 -
Mibi10g1394 1338 ProSiteProfiles Protein kinase domain profile. 322 605 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi10g1394 1338 Gene3D Phosphorylase Kinase; domain 1 282 397 - -
Mibi10g1394 1338 Gene3D Phosphorylase Kinase; domain 1 973 1087 - -
Mibi10g1394 1338 CDD STKc_IRAK 1018 1289 - -
Mibi10g1394 1338 ProSitePatterns Serine/Threonine protein kinases active-site signature. 443 455 IPR008271 GO:0004672|GO:0006468
Mibi10g1394 1338 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 77 627 - -
Mibi10g1394 1338 FunFam Cysteine-rich receptor-like protein kinase 3 831 932 - -
Mibi10g1394 1338 ProSiteProfiles Gnk2-homologous domain profile. 25 131 IPR002902 -
Mibi10g1394 1338 ProSitePatterns Protein kinases ATP-binding region signature. 1018 1040 IPR017441 GO:0005524
Mibi10g1394 1338 ProSiteProfiles Protein kinase domain profile. 1012 1303 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi10g1394 1338 ProSiteProfiles Gnk2-homologous domain profile. 137 240 IPR002902 -
Mibi10g1394 1338 FunFam Cysteine-rich receptor-like protein kinase 2 1088 1295 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi10g1394 Mibi-ChrMibi10 34617521 34626795 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi10g1394 5 605 Receptor kinase-like Gene Family AT1G70520 39.680 2.86e-142 446
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mibi10g1394 Pkinase 5.7e-47 CL0016