Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g1390 ATGGAAACTGCTTATTCGGTTTTCTGGCTTCTGATGAGTCTGTTGCTTCTGGCGTTGATGGAGATTTCTTCTGCTACGCTTTCTCCTTCTGGGATAAATTATGAAGTTGTTGCTCTGATGGCCATAAAAAATGACTTGCACGATCCTCACAATGTCCTGGACAGTTGGGATATTAATTCTGTCGATCCTTGTAGCTGGAGGATGATTACTTGTACCCCAGATGGCTTCGTATCTTCTTTAGGATTGCCCAGTCAGAACTTGTCTGGCAAGCTATCTCCTGGGATTGTAAATCTGACAAACTTGCAATCTGTGTTACTTCAGAACAATGCCATTTCTGGTTCAATTCCCGCTGCTATAGGAAAGCTGGAAAAGCTTCAGACACTTGATCTTTCCAATAATACATTTACCGGTGAGATACCTACCTCTCTGGGGAGCCTCAAGAACCTGCATTATCTGCGGTTGAATAATAACAGCCTTTCAGGATCCTGCCCCCAGTCTCTTGGCAACATCGAAGGTCTAACCCTTGTGGATCTCTCTTATAACAATCTGAGTGGTTCGTTGCCAAGAATATCAGCAAGAACATTCAAGATTGTGGGAAACTCTTTGATTTGTGGTCCAAATGCTAACAATAACTGCTCTAATGTTCTGCCGGAGCCACTTTCCTTCCCTCCAGATTCTTTAAGAGGCCAATCAGCATCTGGGACAAAAGGTCATCATGTTGCAGTTGCTTTTGGAGCAAGTTTTGGAGCTGCTTTTGTCATTGTGATTATTGCTGTGTTTATTGTTTGGTTGCGGTACAGACATAACAAACAGATATTCTTTGATGTTAATGAGCAATATGACCCAGAGGTGCGGCTTGGCCATTTGAAAAGGTATACATTCAAAGAACTTCGAGCTGCAACAGATCATTTCAATTCAAAGAACATTCTCGGACGGGGCGGCTTTGGAATAGTTTACAAAGGGCGTTTCAATGATGGTTCTGTTGTAGCAGTGAAAAGATTGAAGGACTATAATGCTGGTGGTGGTGAAATCCAATTTCAAACAGAAGTAGAGACCATAAGTTTGGCTGTTCACCGGAATCTCTTGAGACTTTGTGGGTTTTGCAGTACTGAAAATGAAAGGCTCCTTGTTTATCCATATATGCCTAATGGCAGTGTAGCCTCCCGATTAAAAGATCATATTCATGGTCGACCAGCCTTAGATTGGGTGAGGAGGAAGAGAATAGCCTTGGGTACAGCTAGAGGGTTGGTTTACTTGCACGAGCAGTGCGACCCTAAAATCATTCACCGAGATGTAAAAGCAGCCAACATCTTGTTGGATGAAGACTTTGAAGCAGTTGTTGGTGATTTTGGCCTGGCAAAGCTTCTGGATCACAGAGAATCTCATGTAACAACTGCTGTGCGTGGAACTGTTGGTCACATTGCTCCAGAATATTTATCTACAGGCCAATCATCAGAAAAGACTGATGTGTTTGGTTTTGGGATCTTACTTCTCGAGCTGATCACAGGCCATAAGGCTCTGGATTTTGGACGAGCAGCAAACCAGAAAGGTGTAATGCTTGATTGGGTTAAGAAGCTACATCAAGAAGGAAGATTGAGTCAAATGGCTGACAAAGATTTGAAGGGAAATTTTGATGCAGATGAACTGGAAGAAATGGTTCAGGTTGCACTGTTATGCACACAATTTAATCCTCTGCACAGACCTAAGATGTCAGAAGTTTTGAAGATGTTGGAGGGAGATGGCTTGGCTGAGAGGTGGGAGGAAGCTTCTCAGAAGACAGAGACAAGGTTCAGGTCTTTTGAAAACCCTCCTCAAAGGTACTCAGATTTTATAGAAGAATCTTCACTCATTCTTGAAGCTATAGAGCTTTCTGGCCCTAGGTGA 1884 0.4289 METAYSVFWLLMSLLLLALMEISSATLSPSGINYEVVALMAIKNDLHDPHNVLDSWDINSVDPCSWRMITCTPDGFVSSLGLPSQNLSGKLSPGIVNLTNLQSVLLQNNAISGSIPAAIGKLEKLQTLDLSNNTFTGEIPTSLGSLKNLHYLRLNNNSLSGSCPQSLGNIEGLTLVDLSYNNLSGSLPRISARTFKIVGNSLICGPNANNNCSNVLPEPLSFPPDSLRGQSASGTKGHHVAVAFGASFGAAFVIVIIAVFIVWLRYRHNKQIFFDVNEQYDPEVRLGHLKRYTFKELRAATDHFNSKNILGRGGFGIVYKGRFNDGSVVAVKRLKDYNAGGGEIQFQTEVETISLAVHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLKDHIHGRPALDWVRRKRIALGTARGLVYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRESHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGHKALDFGRAANQKGVMLDWVKKLHQEGRLSQMADKDLKGNFDADELEEMVQVALLCTQFNPLHRPKMSEVLKMLEGDGLAERWEEASQKTETRFRSFENPPQRYSDFIEESSLILEAIELSGPR 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g1390 627 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 8 588 - -
Mibi10g1390 627 Pfam Leucine rich repeat 99 159 IPR001611 GO:0005515
Mibi10g1390 627 FunFam Somatic embryogenesis receptor-like kinase 1 381 597 - -
Mibi10g1390 627 SUPERFAMILY L domain-like 33 201 - -
Mibi10g1390 627 Pfam Protein kinase domain 305 575 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi10g1390 627 ProSitePatterns Serine/Threonine protein kinases active-site signature. 427 439 IPR008271 GO:0004672|GO:0006468
Mibi10g1390 627 Gene3D Transferase(Phosphotransferase) domain 1 381 597 - -
Mibi10g1390 627 SUPERFAMILY Protein kinase-like (PK-like) 281 578 IPR011009 -
Mibi10g1390 627 ProSitePatterns Protein kinases ATP-binding region signature. 310 332 IPR017441 GO:0005524
Mibi10g1390 627 Gene3D Ribonuclease Inhibitor 32 214 IPR032675 -
Mibi10g1390 627 SMART serkin_6 304 577 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi10g1390 627 FunFam Putative LRR receptor-like serine/threonine-protein kinase 32 214 - -
Mibi10g1390 627 Pfam Leucine rich repeat N-terminal domain 33 71 IPR013210 -
Mibi10g1390 627 Gene3D Phosphorylase Kinase; domain 1 273 380 - -
Mibi10g1390 627 FunFam Somatic embryogenesis receptor kinase 1 273 380 - -
Mibi10g1390 627 ProSiteProfiles Protein kinase domain profile. 304 587 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi10g1390 Mibi-ChrMibi10 34538982 34543409 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi10g1390 68 627 Receptor kinase-like Gene Family AT1G60800 76.801 0.0 833
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Mibi10g1390 Pkinase 1.5e-43 CL0016