Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g1383 ATGCCTCGTCCTCTCTCCCTCTCTCTCGCCATGTCAACACTCAACGAGCTTCATCTTCAAGAAAGGATATGTTATTTGCAATGCGGCTTCTGCAGCACCATATTACTGGTGAGTGTTCCATGCAACAGTTTTTCAATGGAGGTGACTGTGAGATGTGGGAACTGCTCAAATCTACTCTTTCTTAATATGATGAAAGCTTCTTTTGTCCCTTTCCAACTCTTTCCTCCTTCCCACCTTACTCGTATTGATCAGCCCAAAGAGGGAACTACAGAAGAAAATGCAGACAAGAGTACTTGTTCTGATAGTGGGGAAGATGATGCTAATCCAATGAGTCCTGCCACTAATGAACGCCCAAGGAAAAGACAAAAAACACCATCGGCTTATAATCGCTTCATCAGAGAAGAGATCAGAAGGCTGAAGACTGAAAACCCAGACATGCTTCACAAGGAAGCTTTCAGAACAGCGGCCAAAAATTGGGCCAATTTTCCTCAAGCTCAACCTAAAGGAGATGAAGAGAGCTGA 522 0.4406 MPRPLSLSLAMSTLNELHLQERICYLQCGFCSTILLVSVPCNSFSMEVTVRCGNCSNLLFLNMMKASFVPFQLFPPSHLTRIDQPKEGTTEENADKSTCSDSGEDDANPMSPATNERPRKRQKTPSAYNRFIREEIRRLKTENPDMLHKEAFRTAAKNWANFPQAQPKGDEES 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g1383 173 MobiDBLite consensus disorder prediction 80 131 - -
Mibi10g1383 173 Pfam YABBY protein 19 165 IPR006780 GO:0007275
Mibi10g1383 173 PANTHER PROTEIN YABBY 6-RELATED 11 167 IPR006780 GO:0007275
Mibi10g1383 173 SUPERFAMILY HMG-box 116 165 IPR036910 -
Mibi10g1383 173 MobiDBLite consensus disorder prediction 84 102 - -
Mibi10g1383 173 Gene3D High mobility group box domain 110 169 IPR036910 -
Mibi10g1383 173 MobiDBLite consensus disorder prediction 116 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi10g1383 Mibi-ChrMibi10 34455486 34456830 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi10g1383 12 168 C2C2-YABBY Transcription Factor Family AT1G23420 48.276 1.89e-46 151
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Mibi10g1383 YABBY 3.6e-50 CL0114