Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g1363 ATGAAATCTAGCGACGACGAAACGAACAATGATAATGATTCACCGTCTCCAGAAGCATCAATATCATCGCCTCCTCCAATTTCAGACATTCATCCGATGAACTCCTCACATAAAGACAAAAAATCTCCACCGTCACCACCGCCTCCTCCAAAATCGGGAAAGGATTCCGATGACGACGAAGCTCCGCCGCCGAATTCTAACGATTCTAGCTCACCGTCACCTGAACAATCACCTTCTCAGAAATCTCCACCGCCACCGTCACCGTCGCCGCCGCCTGCTCCGCCGGTAGCGCCACCACCTCCTCCTCCGGCAAATCCTCCGCCTAGTCCGCCGGTGAAGAAATCGCCTCAATCTATACAACCTCCCACATCTTCACCACCGACATTATCGAGTAATTGGGGAAATCTCTCTCCACCACCACCACCACCACCAGTACAACCTCTTGCTCAAGTCAATTTCCCCTCGTTGATTCAAAATGTTCCTCCGCCACCAACGAATCATTCTTCACTGCCTCACTCTCACTCCGTGAAGTCACGAGGGCACGGTGGCAGTGGAAGCGACGGTGATACAGCAAAGTTTGTGGGTTTTGGATTCGCCGGAGTCTTTCTCGGTGTCTTTTTTGTTGTTTGTTTTTTGGTCGTGAAGAGTAGAAACAGAAAACGAGGGGCCGTCCATGATTTATCGCATATACAGCCACATATGAATGCAGCAGGTGAAGATTGGCGTTACTATGGACTGCAGCCCCTGCAAGATGACCATTACAAAAATGGGAGTCAAATGGGAACTTCAGAGTCAGTGCAGCCAATGAATGGTCAGACTGCTTTTAGCTATGAAAGTATTGTGGAGATAACAGATGGGTTTTCTAGTCAAAACATTATAGGAGAAGGGGGATTTGGGTGCGTTTACAAGGGTTGGCTGCCAGATGGAAGAGTTGTAGCAGTCAAGAAGCTTAAGGCAGGAAGTGGGCAAGGAAAAGGAATGCTAGTGTTAGATTGGGAAAAGAGGATGAAGATAGCTATTGGTGCCGCAAGAGGCCTGGCATATCTGCACGAGGATTGCCACCCAAAGATTATCCACAGAGATATAAAGTCAGCAAATATACTTTTGGATGATGCTTATGTGGCAAAGGTTTCAGACTTTGGACTTGCAAGACTAACGGATGATGCTAATACTCATGTATCAACTCGCGTCATGGGTACCTTTGGATACATGGCTCCAGAATATGCAACAAGTGGAAAATTAACAGATAGGTCGGATGTTTTCTCCTTTGGAGTTGTCCTCCTAGAGCTTTTGACCGGAAGGAAATCAGTTGATCAAACTCAACCATTGGGAGAAGAGAGTTTGGTTGAGTGGGCTAGACCTCTTCTCATTCATGCAGTTGAGACTGGTGACTTTAGCAAACTAATAGACACAAGGCTTGAAAATCTTTATGTGGAGAGTGAAGTACTTAGAATGATTGAGGCGGCTGCAGCATGTGTTCGCCATTCTGCCCCAAAACGGCCCCGGATGCTTCAGGTATTAGAAAAAGTCGCGAGAGCTTTAGATAGTGGAGGTGAACTAGTTGACCTATCCAACGGAATGAAATATGGTCAGAGCACTGTTTATGGTTCTGGACAGTATGATGAAGAAATGACAAGATTTAGGATGATGAATGGTGCAAGCTTTAACAGTTCTGAATTTGATTTCCTTAGTGAAGATTACAGTTCACGAGAATTATCTGGCTTCCGACACGCATTTGCCCAGGAGGATAGTTCTGGTGGCGAGTCTACCTCTCAAGCTTTCACCAAAGATGGGAGCAGTGGGAAATTGAAGGGATGA 1818 0.4648 MKSSDDETNNDNDSPSPEASISSPPPISDIHPMNSSHKDKKSPPSPPPPPKSGKDSDDDEAPPPNSNDSSSPSPEQSPSQKSPPPPSPSPPPAPPVAPPPPPPANPPPSPPVKKSPQSIQPPTSSPPTLSSNWGNLSPPPPPPPVQPLAQVNFPSLIQNVPPPPTNHSSLPHSHSVKSRGHGGSGSDGDTAKFVGFGFAGVFLGVFFVVCFLVVKSRNRKRGAVHDLSHIQPHMNAAGEDWRYYGLQPLQDDHYKNGSQMGTSESVQPMNGQTAFSYESIVEITDGFSSQNIIGEGGFGCVYKGWLPDGRVVAVKKLKAGSGQGKGMLVLDWEKRMKIAIGAARGLAYLHEDCHPKIIHRDIKSANILLDDAYVAKVSDFGLARLTDDANTHVSTRVMGTFGYMAPEYATSGKLTDRSDVFSFGVVLLELLTGRKSVDQTQPLGEESLVEWARPLLIHAVETGDFSKLIDTRLENLYVESEVLRMIEAAAACVRHSAPKRPRMLQVLEKVARALDSGGELVDLSNGMKYGQSTVYGSGQYDEEMTRFRMMNGASFNSSEFDFLSEDYSSRELSGFRHAFAQEDSSGGESTSQAFTKDGSSGKLKG 605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g1363 605 Gene3D Transferase(Phosphotransferase) domain 1 323 521 - -
Mibi10g1363 605 ProSiteProfiles Protein kinase domain profile. 188 514 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi10g1363 605 MobiDBLite consensus disorder prediction 133 149 - -
Mibi10g1363 605 ProSitePatterns Protein kinases ATP-binding region signature. 293 316 IPR017441 GO:0005524
Mibi10g1363 605 MobiDBLite consensus disorder prediction 1 186 - -
Mibi10g1363 605 SUPERFAMILY Protein kinase-like (PK-like) 261 508 IPR011009 -
Mibi10g1363 605 MobiDBLite consensus disorder prediction 583 598 - -
Mibi10g1363 605 FunFam proline-rich receptor-like protein kinase PERK8 314 529 - -
Mibi10g1363 605 MobiDBLite consensus disorder prediction 581 605 - -
Mibi10g1363 605 ProSitePatterns Serine/Threonine protein kinases active-site signature. 357 369 IPR008271 GO:0004672|GO:0006468
Mibi10g1363 605 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 205 326 - -
Mibi10g1363 605 MobiDBLite consensus disorder prediction 77 123 - -
Mibi10g1363 605 SMART serkin_6 287 514 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi10g1363 605 Gene3D Transferase(Phosphotransferase) domain 1 269 322 - -
Mibi10g1363 605 Pfam Protein kinase domain 336 442 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi10g1363 605 PRINTS Proline rich extensin signature 10 26 - -
Mibi10g1363 605 PRINTS Proline rich extensin signature 41 53 - -
Mibi10g1363 605 PRINTS Proline rich extensin signature 74 95 - -
Mibi10g1363 605 PRINTS Proline rich extensin signature 95 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi10g1363 Mibi-ChrMibi10 34291625 34296271 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi10g1363 183 597 Trihelix Transcription Factor Family AT1G70460 49.795 8.70e-144 431
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Mibi10g1363 Pkinase 7.9e-26 CL0016