Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g1358 ATGAAAGGAGAAGAAGGGAACGAGTACAAGAAGGGACTGTGGACAGAGGAAGAAGACAGGGTTTTGATGGAATACATTAAGGTTCATGGAAGAAGCCATTGGAACCGCATTTCCAAAGTCACCGGTTTAATGAGGAGTGGAAAGAGTTGCAGATTAAGGTGGCTGAATTATCTGAGTCCAAACGTCAAACATGGAAGTTTCTCTGAGGAAGAAGACGATCTCATCATTCGTCTTCATAATCTCCTTGGAAACAGGTGGTCTCTAATAGCAGGAAGGGTACCCGGAAGAACGGACAACCAAGTAAAGAACCATTGGAACACTCATTTGTGCAAGAAACTTGGTATTGCTAAGCACACCAGGAAACCAAACAAGAAAAAGGTATCTCCAAAACTCACGGCTTCACAGCTAGAAGAGGCTCGAAATGTTCATTCGTCTTCGAGTTCTATGGATATTGTTCCTCTCACTCTCAACAACAAAGACAAAGAGGTTGAGATACACCAGCAAGGAAACTATGTAAACAACAATCCCACTACAAACATTGAGGGGGTACATCATTGTTGGCCGCAAAATGAACAAGATCACTTTGACCAAACTTTTATTTTTGATGATGATCATACTTTTGTTCTACATAGTCCTCCTAGATTAATGGAATTTTTTGATGGATTTGATGTAATTTAA 678 0.4041 MKGEEGNEYKKGLWTEEEDRVLMEYIKVHGRSHWNRISKVTGLMRSGKSCRLRWLNYLSPNVKHGSFSEEEDDLIIRLHNLLGNRWSLIAGRVPGRTDNQVKNHWNTHLCKKLGIAKHTRKPNKKKVSPKLTASQLEEARNVHSSSSSMDIVPLTLNNKDKEVEIHQQGNYVNNNPTTNIEGVHHCWPQNEQDHFDQTFIFDDDHTFVLHSPPRLMEFFDGFDVI 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g1358 225 CDD SANT 14 58 IPR001005 -
Mibi10g1358 225 ProSiteProfiles Myb-like domain profile. 59 109 IPR001005 -
Mibi10g1358 225 SMART sant 63 111 IPR001005 -
Mibi10g1358 225 SMART sant 10 60 IPR001005 -
Mibi10g1358 225 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 59 113 IPR017930 -
Mibi10g1358 225 FunFam Transcription factor WER 65 141 - -
Mibi10g1358 225 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 7 173 - -
Mibi10g1358 225 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 6 58 IPR017930 -
Mibi10g1358 225 Gene3D - 4 64 - -
Mibi10g1358 225 ProSiteProfiles Myb-like domain profile. 6 58 IPR001005 -
Mibi10g1358 225 Pfam Myb-like DNA-binding domain 11 58 IPR001005 -
Mibi10g1358 225 Pfam Myb-like DNA-binding domain 65 109 IPR001005 -
Mibi10g1358 225 CDD SANT 66 109 IPR001005 -
Mibi10g1358 225 FunFam MYB-related transcription factor 10 63 - -
Mibi10g1358 225 SUPERFAMILY Homeodomain-like 9 105 IPR009057 -
Mibi10g1358 225 Gene3D - 65 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi10g1358 Mibi-ChrMibi10 34241491 34244640 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi10g1358 8 222 MYB Transcription Factor Family AT5G40330 47.222 2.56e-62 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mibi10g1358 Myb_DNA-binding 2.7e-14 CL0123