Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g1336 ATGAGTTGTACTTTTCTGCGCATAATAAATCCATGTGCTATAAAGGAAGAAGAAAGGAATCAAAGAAAAGTTTCCCTACTACTGGTTATGGCATCAAGATCATATGCTAATCTCCTAGACTTAGCAAGTGGAGACTTATTGGCTATTCCTCACACCCCAAGAATTCTTCCAAGGGTTGTTACAGTTCCAGGAATTATTTCAGAACTGGATCGTCAAGGTTGTGATGATGGGGATTCTGATGTCAGCTCTTCTGGGTGTCGAGAGCGGAAAATTATTGTGGCAAACATGCTGCCATTGCAGGCTAAAAGGGACTTGCAAACTTCTAAATGGTGCTTCAGCTTGGATAAGGATTCACTTTTATTACAACTAAAGGATGGGTTTTCTTCTGATACTGAGGTGATCTATGTGGGGTCCCTCAAGGTTGAAATAGAGTCCAGTGAGCAGGATGAAGTTGCTCAGAATTTAATGGAAAACTTCAATTGTATGCCTACTTTTCTACCTCATGATCTCCAGAAAAAGTTTTATCTTGGATTTTGTAAGCAGCAGCTGTGGCCTCTCTTTCATTATATGCTGCCCATGTGTTCAGATCATGGTGATCGCTTTGACCGCACACTTTGGCAGGCTTATGTTTCTGCTAACAAAATATTTGCAGATAAGGTTATGGAAATAATTAATCCTGATGATGATTTTGTCTGGGTCCATGACTATCACTTGATGGTGTTGCCTACATTTCTGAGGAAGAGATTTAATCGAGTTAAACTTGGTTTCTTCCTTCACAGCCCTTTCCCTTCATCTGAAATTTACCGAACCTTACCAGTACGAGATGAAATTCTCAGGGGATTGTTGAATTCTGACTTAATTGGTTTTCACACATTTGATTATGCTCGCCACTTCCTCTCTTGCTGCAGTAGAATGTTGGGTCTGGACTATGAATCTAAGCGGGGACATATTGGACTTGACTATTTTGGCCGCACTATATTTATCAAGATTTTGCCTGTAGGCATTCACATTGGTAGGCTTGAATCTGTTTTGGATCTGTCTTCTACATCTGATAAAATGAAAGAAATCCAGGAAGAGTTTAAGGGTAGGAAAGTAATTCTTGGTGTTGATGATATGGATATTTTTAAGGGCATCAGCTTGAAACTACTAGCTCTAGAGCAGCTGCTGCATCAGCATCCTGATTTGCTGGGTAAAATTGTACTAGTTCAAATTGTGAATCCTGCCAGGGGTTCTGGCAAGGATGTTCAGGAGGCAAAGAAGGAAACATATTTAATTGCCCAGAGGATCAATGATACTTACGGTTCACCTCATTATCAACCAGTTGTTCTCATTGATCGTCCTGTTCCTCGTTTTGAGAAGAGTGCTTATTATGCTGTAGCAGAATGTTGCATTGTCAATGCTGTGAGGGATGGCATGAATTTGGTCCCCTACAAATATGTTGTCTGCAGACAAGGAACTTCAAAACTGGATCAAGCATTGGATAGAAAAGATGATGCTCCTCGTACAAGCATGCTTGTTGTGTCGGAGTTTATTGGCTGCTCACCTTCCTTAAGTGGAGCAATTAGGGTTAACCCCTGGGATATAGATGCCGTTGCTGAAGCTCTGAATTTGGCAATTACAATGAATGATTCAGAGAAGAAATTGCGGCATGAGAAGCATTATCGGTATGTCAGCTCCCATGATGTGGCTTATTGGGCGCGCAGTTTTATGCAGGATTTGGAGAGAGCATGCAAAGATCATTACACCAAATGGTGCTGGGGAATTGGTTTGGGCCTGGGGTTCAGAGTTGTTTCTCTTTCTCATGGTTTTAGGAAGTTGTCTGTTGATCACATTGTTTCAGCATACAGGAGAACCTGTAGAAGGGCCATATTTCTCGATTATGATGGCACTGTTGTACCACAATCTTCCATAAATAAAGTCCCCAGCCCTGAAGTCATATCTGTTCTGAATACTTTGTGCAATGATCCTAAAAACACTGTGTTCATTGTTAGTGGGAGGGGAAGAGTTTCTTTGGGTGATTGGTTTGCTTCATGCAAATTGCTGGGAATTGCTGCTGAACATGGGTACTTCTTAAGGTGGAGCAGTTCCTGCCATTGGGAAACAAGTCACCTGTCTGCTGACCTTGATTGGAAAAACGTTGTGGAACCTATAATGAGGTCCTACATGGAAGCAACTGATGGATCTAATCTTGAAATTAAGGAAAGTGCATTGGTGTGGCATCATCAAGATGCAGACCCTGATTTTGGTTCTTGCCAAGCCAAAGAATTATTGAATCACCTTGAAAGCGTGCTTGCGAATGAACCGGCTGTTGTTAAGAGGGGGCAGCATATTGTTGAAGTGAAGCCACAGGGAGTAAGCAAGGGTTTGGTGTCTGAAAAGGTTCTTACGACTATGGTCAATGATGGGGATCCACCAGATTTTGTTTTGTGCATTGGAGATGATAGGTCTGATGAAGACATGTTTGAGAGCATACTAAGGACAATCTCTTGTCCATCATTGCCAGTTGCTCCAGAGATCTTTGCCTGCACTGTTGGCCAGAAGCCTAGCAAGGCCAAGTATTTTCTCGATGATGCTGCTGATGTGGTAAAATTGCTTCAGGGCCTTGGCACTGCATCAAATCCGAATCCCAGGCATTTAGCCCATTTCCAGGTTTCTTTTGAGAGCACAGTTTGA 2673 0.4212 MSCTFLRIINPCAIKEEERNQRKVSLLLVMASRSYANLLDLASGDLLAIPHTPRILPRVVTVPGIISELDRQGCDDGDSDVSSSGCRERKIIVANMLPLQAKRDLQTSKWCFSLDKDSLLLQLKDGFSSDTEVIYVGSLKVEIESSEQDEVAQNLMENFNCMPTFLPHDLQKKFYLGFCKQQLWPLFHYMLPMCSDHGDRFDRTLWQAYVSANKIFADKVMEIINPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRTLPVRDEILRGLLNSDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTIFIKILPVGIHIGRLESVLDLSSTSDKMKEIQEEFKGRKVILGVDDMDIFKGISLKLLALEQLLHQHPDLLGKIVLVQIVNPARGSGKDVQEAKKETYLIAQRINDTYGSPHYQPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYVVCRQGTSKLDQALDRKDDAPRTSMLVVSEFIGCSPSLSGAIRVNPWDIDAVAEALNLAITMNDSEKKLRHEKHYRYVSSHDVAYWARSFMQDLERACKDHYTKWCWGIGLGLGFRVVSLSHGFRKLSVDHIVSAYRRTCRRAIFLDYDGTVVPQSSINKVPSPEVISVLNTLCNDPKNTVFIVSGRGRVSLGDWFASCKLLGIAAEHGYFLRWSSSCHWETSHLSADLDWKNVVEPIMRSYMEATDGSNLEIKESALVWHHQDADPDFGSCQAKELLNHLESVLANEPAVVKRGQHIVEVKPQGVSKGLVSEKVLTTMVNDGDPPDFVLCIGDDRSDEDMFESILRTISCPSLPVAPEIFACTVGQKPSKAKYFLDDAADVVKLLQGLGTASNPNPRHLAHFQVSFESTV 890
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g1336 890 SUPERFAMILY HAD-like 621 868 IPR036412 -
Mibi10g1336 890 FunFam Trehalose-6-phosphate synthase 2 704 783 - -
Mibi10g1336 890 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 89 578 - -
Mibi10g1336 890 FunFam Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 750 881 - -
Mibi10g1336 890 Pfam Glycosyltransferase family 20 89 574 IPR001830 GO:0003824|GO:0005992
Mibi10g1336 890 CDD HAD_TPP 622 863 - -
Mibi10g1336 890 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 620 737 - -
Mibi10g1336 890 Gene3D Glycogen Phosphorylase B; 343 558 - -
Mibi10g1336 890 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 58 869 IPR001830 GO:0003824|GO:0005992
Mibi10g1336 890 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 82 341 - -
Mibi10g1336 890 Gene3D Glycogen Phosphorylase B; 83 342 - -
Mibi10g1336 890 CDD GT20_TPS 89 574 IPR001830 GO:0003824|GO:0005992
Mibi10g1336 890 Gene3D - 750 881 IPR023214 -
Mibi10g1336 890 Gene3D - 620 738 IPR023214 -
Mibi10g1336 890 Pfam Trehalose-phosphatase 624 857 IPR003337 GO:0003824|GO:0005992
Mibi10g1336 890 FunFam Alpha,alpha-trehalose-phosphate synthase 343 558 - -
Mibi10g1336 890 TIGRFAM T6PP: trehalose-phosphatase 620 867 IPR003337 GO:0003824|GO:0005992
Mibi10g1336 890 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 622 823 IPR006379 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi10g1336 Mibi-ChrMibi10 33894148 33897444 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi10g1336 30 890 Trehalose Biosynthesis Gene Families AT1G60140 74.100 0.0 1366