Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g1304 ATGATTCTTCACCGTTCCACTTTCATGTTACATCTCCAAATACCCTCAATTCGATCCCATTTCTTCAAGCATTCCTTCTCCATCATCTCCACTTTTTCTTCTTCTCCTTCTTTGGTTAATGTTCCCTTCCTTTCACTTTCTCTTCCTCGCCGGCGCCTATTCCGGTCGTTCGGGAGCTCCGTCGTGGCGGAAGTAGCAAATGCAAAAGGTAGAGACACATTCTTGGCGGAAGATAATGTTTCGTGGAATTCTATTGGTTTGTCTCATTCCATTTCCCGAGCTCTCTCTAGCATTGGTCTCCATAGGCCTTCTCTTGTCCAGGCTTCTTCTATACCATCTGTGCTTTCTGGGAAGGACGTGGTTATTGCTGCAGAGACTGGTAGTGGTAAAACACACAGTTACCTAGTGCCTCTAATTGATAGGCTGCGAGGTTCCGACAACAATTCTGAAAATACCGTTGATAATCAAAAAGAACCTTTCTGTAAGATTCTGCTTGTTCTGTGTCCTAATGTACAGCTCTGTGAACAAGTAGTTCAAATGGCTAACAGTATTTGTGGGGACAATGGTGCACCGATAGTTAGCGTGGCAGCCATTTGCGGCAGACAGGGATGGCCAATTCGTGAACCTGATATAATTGTGACAACACCTGTTGCTCTTCTGAACTTTGTTGAGCAAAACAGAAATCGTCGGTTGGAATTTATGCACAGTGTTAAATATGTGGTATTTGATGAAGCTGATATGCTTCTCTGTGGAAGTTTCCAAAATAAAGTGATTCGTCTGATAAACTTGCTTCGCTTTGACGAAAAAATGTTATCCCAATCAAGAGAACCAGTATCAGAGTTACCATTGGAGCTAGAATCTACCTTGTCATCACACAGTGCTGTATATGATGAACAGAAACAGCCCACTGAAGACAGCATCCCAGAAGATGGGGATGAGAATACCTATATGGTCACCAATAATGAAGCTGGTTCAATCAAAAGAAGAGACTGGAGGAGAGTGAGAAAAAATTATGAGCGTAGTAAGCAGTACATTTTTGTTGCAGCCACGCTTCCTGTAAATGGGAAGAAAACAGCTGGAGCAATATTAAAACATATGTTTCCTGATGCTGAGTGGGTTAGTGGAAATTATCTTCATTGTCACAATCCAAGATTGGAGCAGAGGTGGGTTGAAGTTACTGTTGAGACACAGGTGGATGAACTCATAAAAGCTGTGAGGCACAGGTTTAGTCAAGATTTGGATAGTTTTGGGGGCATTTCTCGAACAATGGTGTTTGCCAACACTGTTGAGGCTGTTGAAGCTGTGGCAAAGATATTGGTCAGATCTGGGATTGAATGCTTATGCTATCATAAGAATCGCACCTTGGATGAGCGAGCTAAGGCCTTAGTTGAATTCCGGGAGAAAGGTGGTGTTCTTGTTTGCACTGATGCAGCGGCTCGTGGTGTTGATATTCCAAACGTCTCACATGTTATCCAGGCAGATTTTGCTAGTTCTGCTGTAGACTTCTTGCATCGAGTTGGCAGAACTGGTCGAGCCGGTCAATTTGGACTTGTTACTAGCATGTACACTGAATCTAACAGGGAGCTTGTCGATGCGGTTCGCCGAGCAGGGGAACTTGGTCGACCTGTGGAGACAGCATTTAGCAGGAAAAGAAGTTTCCGTAACAAGATAAAGAAGAGGGCAGCGAATCTTGTCAGTGATTCAGACCACAATGTTAAAGAGAGTGCTCTGGCGTGA 1737 0.4381 MILHRSTFMLHLQIPSIRSHFFKHSFSIISTFSSSPSLVNVPFLSLSLPRRRLFRSFGSSVVAEVANAKGRDTFLAEDNVSWNSIGLSHSISRALSSIGLHRPSLVQASSIPSVLSGKDVVIAAETGSGKTHSYLVPLIDRLRGSDNNSENTVDNQKEPFCKILLVLCPNVQLCEQVVQMANSICGDNGAPIVSVAAICGRQGWPIREPDIIVTTPVALLNFVEQNRNRRLEFMHSVKYVVFDEADMLLCGSFQNKVIRLINLLRFDEKMLSQSREPVSELPLELESTLSSHSAVYDEQKQPTEDSIPEDGDENTYMVTNNEAGSIKRRDWRRVRKNYERSKQYIFVAATLPVNGKKTAGAILKHMFPDAEWVSGNYLHCHNPRLEQRWVEVTVETQVDELIKAVRHRFSQDLDSFGGISRTMVFANTVEAVEAVAKILVRSGIECLCYHKNRTLDERAKALVEFREKGGVLVCTDAAARGVDIPNVSHVIQADFASSAVDFLHRVGRTGRAGQFGLVTSMYTESNRELVDAVRRAGELGRPVETAFSRKRSFRNKIKKRAANLVSDSDHNVKESALA 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g1304 578 MobiDBLite consensus disorder prediction 292 317 - -
Mibi10g1304 578 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 111 369 IPR014001 -
Mibi10g1304 578 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 397 565 IPR001650 -
Mibi10g1304 578 CDD DEADc 91 271 - -
Mibi10g1304 578 Pfam DEAD/DEAH box helicase 106 272 IPR011545 GO:0003676|GO:0005524
Mibi10g1304 578 Gene3D - 60 367 IPR027417 -
Mibi10g1304 578 Gene3D - 386 577 IPR027417 -
Mibi10g1304 578 SMART ultradead3 99 388 IPR014001 -
Mibi10g1304 578 CDD SF2_C_DEAD 385 522 - -
Mibi10g1304 578 Pfam Helicase conserved C-terminal domain 420 513 IPR001650 -
Mibi10g1304 578 PANTHER ATP-DEPENDENT RNA HELICASE DBP3 91 545 - -
Mibi10g1304 578 SMART helicmild6 433 513 IPR001650 -
Mibi10g1304 578 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 111 525 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi10g1304 Mibi-ChrMibi10 33160309 33164252 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi10g1304 328 539 Eukaryotic Initiation Factors Gene Family AT5G11200 28.689 7.09e-15 75.5