Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g1300 ATGCCGTCTGATAGATCGAAATCCGAGAAGCGTGATGCTGTGAAGCAGCTCCGTCGGGACCCCTATGAGGTTCTCGGCGTCTCCAAGAACTCAACGGATCATGAAATTAAAACTGCTTACCGTAAATTGGCACTCAAATATCATCCTGACAAGAATGCTAATGATCTTAAAGCAGCGGATAAGTTCAAAGAGGCCGCCTTTTCATATAATATCTTCTCTAAGGAGCAATGTCTTTGTTTTGAATGCTCCTTCCCTGCTAATTTTATCACCTTCTCATGCTCAGTTATCTTCATACATGTCAGTAAACTTGGTGTGCCTATTAAGACTACTGTATCAGCAACTGTTTTGGAAGAGGCACTTAATGGGGCTGTTATCACTCATCCACTTCCATTGGGGCAGCCTTTATCTAAAAGGGTTGAGAAGCAATGTGCTCACTTTTATTCGGTTACATTAACAGAAGAAGAAGCACGGGATGGATTCGTTTGCCGTGTGCAATCATCAGACAAAAGCAAGTTCAAGTTACTATATTTTGATCAAGAAGAGACTGGTGGACTAAGTCTTGCACTCCAGGCATCTGCTGCTAAGGATCCTGATGCACTATTTTTCAGAAAGTTAGATGGGTTCCGACCATGTGAATTAACAGAACTAAAGGCCGGTACTCATATTTTTGCCGTTTATGGTGACAATTTTTTCAGAAGTGCAAGCTACACTATAGAAGCTTCATGTGCTGCACCTTTTAAACAAGAAAAAGAAAATCTCAGAAATGTAGAAGCCCACCTTTTATCTAAGAGGGCTGGCCTAATGAAGTTTGAGTCTGAATACCGGGAGATTGATGAGCTGCTTAAGCAAAGGAATGAAATACGTGCATCATATACTGTTACTCCATTAAAACGGAGTGAAACAAAGAGGAGAAGAAGTTGTTCCAAGGAGGAACAAGAGGATGGCCAAGCAAGAGAGAAGAGACATACAAAAGAGCGACCGAGGAAGAAGAAATGGTATAACATCCGCTTAAAAGCCGAGAAGAGAAAAGCTTGCTAG 1038 0.4162 MPSDRSKSEKRDAVKQLRRDPYEVLGVSKNSTDHEIKTAYRKLALKYHPDKNANDLKAADKFKEAAFSYNIFSKEQCLCFECSFPANFITFSCSVIFIHVSKLGVPIKTTVSATVLEEALNGAVITHPLPLGQPLSKRVEKQCAHFYSVTLTEEEARDGFVCRVQSSDKSKFKLLYFDQEETGGLSLALQASAAKDPDALFFRKLDGFRPCELTELKAGTHIFAVYGDNFFRSASYTIEASCAAPFKQEKENLRNVEAHLLSKRAGLMKFESEYREIDELLKQRNEIRASYTVTPLKRSETKRRRSCSKEEQEDGQAREKRHTKERPRKKKWYNIRLKAEKRKAC 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g1300 345 CDD DnaJ 20 73 IPR001623 -
Mibi10g1300 345 SUPERFAMILY Chaperone J-domain 19 76 IPR036869 -
Mibi10g1300 345 Gene3D DnaJ domain 2 77 IPR036869 -
Mibi10g1300 345 PRINTS DnaJ domain signature 57 77 IPR001623 -
Mibi10g1300 345 PRINTS DnaJ domain signature 22 40 IPR001623 -
Mibi10g1300 345 PRINTS DnaJ domain signature 40 55 IPR001623 -
Mibi10g1300 345 MobiDBLite consensus disorder prediction 293 333 - -
Mibi10g1300 345 MobiDBLite consensus disorder prediction 297 321 - -
Mibi10g1300 345 ProSiteProfiles dnaJ domain profile. 20 77 IPR001623 -
Mibi10g1300 345 Pfam DnaJ domain 20 76 IPR001623 -
Mibi10g1300 345 SMART dnaj_3 19 77 IPR001623 -
Mibi10g1300 345 PANTHER DNAJ DOMAIN (PROKARYOTIC HEAT SHOCK PROTEIN) 192 344 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi10g1300 Mibi-ChrMibi10 33080471 33083664 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi10g1300 22 73 C2H2 Transcription Factor Family AT1G74250 42.105 7.11e-07 48.9