Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g1298 ATGGAAAAAGAACCTGGCTGTGATATTTCTCCTTCATGGGATCATGGAGAAAATGGCCATTCTTCTATGGAGAAAAGGCTAAGGTTATTTGGGTTTGAGCTGAATCCATCTCAGATCAACGAGGCCTGTGTCAAAGACTCTGCAGAAGGATATGATGAAAGCGCGAATTCTTCGAATTCGGTTTCATCAGGGGGAGGGGAGAAAACTGATCAGCAGGAGAAGAGTTCATCTGCAACAAGAGACAACAACATATCAGATCATGAGAGAAAGTTTGAGTGCCAATATTGTTCCAAAGAATTTGCAAACTCACAAGCATTAGGAGGCCACCAAAATGCTCACAAGAAAGAGAGAATGAAGAAAAAGAGGTTGCAGCTTCAAGCCAGGAGGGCTAGCTTAAGCTACTACCTTCATCCTTTTCAAAACAACCCTGGTTTTTCATTTGATGGCTCTAATTCACCTTGGTTTTATGATCCATCATCTTATAATTCTGAGTTTTCTTTGTATGAAGAACCTCAGATTAGCTTCAAAACTAATGATCAAGATGCCATTAATATTCTTAATGGTTCTGATCATAAACCAAATTGGAATTCTCATCCATCATCCCTTTCCCTTCCTTATAAACAAGATACTTCTAGTATGTTCACTTTATCACATACAGATAGTAGGCCTTTCATCTTCCCTGCAGTTTCAAACCAGAGCCATAGTAATAAGAGTTTGGATCTTCAATTAGGCCTAACTTTGCAGTCAAATACACATAATTTAGCTTAG 768 0.388 MEKEPGCDISPSWDHGENGHSSMEKRLRLFGFELNPSQINEACVKDSAEGYDESANSSNSVSSGGGEKTDQQEKSSSATRDNNISDHERKFECQYCSKEFANSQALGGHQNAHKKERMKKKRLQLQARRASLSYYLHPFQNNPGFSFDGSNSPWFYDPSSYNSEFSLYEEPQISFKTNDQDAINILNGSDHKPNWNSHPSSLSLPYKQDTSSMFTLSHTDSRPFIFPAVSNQSHSNKSLDLQLGLTLQSNTHNLA 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g1298 255 PANTHER ZINC FINGER PROTEIN 5 20 248 IPR044299 GO:0010090
Mibi10g1298 255 MobiDBLite consensus disorder prediction 51 79 - -
Mibi10g1298 255 Pfam C2H2-type zinc finger 91 116 - -
Mibi10g1298 255 SUPERFAMILY beta-beta-alpha zinc fingers 87 118 IPR036236 -
Mibi10g1298 255 MobiDBLite consensus disorder prediction 1 21 - -
Mibi10g1298 255 ProSiteProfiles Zinc finger C2H2 type domain profile. 91 118 IPR013087 -
Mibi10g1298 255 ProSitePatterns Zinc finger C2H2 type domain signature. 93 113 IPR013087 -
Mibi10g1298 255 MobiDBLite consensus disorder prediction 43 84 - -
Mibi10g1298 255 Gene3D Classic Zinc Finger 66 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi10g1298 Mibi-ChrMibi10 33034860 33035627 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi10g1298 26 129 C2H2 Transcription Factor Family AT1G68360 44.037 2.77e-17 77.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mibi10g1298 zf-C2H2_6 2.8e-06 CL0361