Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g1290 ATGGAGGTGTGTGATCTATTACCGTCAGATTCTGAAGAGGTTCATGTCTTGGCCGTCGATGACAGCCTCGTTGATCGGAAAGTCATAGAACGCTTGCTTAGGATTTCAGCTTGTAAAGTCACTGCCGTGGACAGTGGAATTAGAGCTCTGCAATTTCTTGGTCTAGACAACCAGAAATCTCCTACTGAATCCGACGGCTTTGATGCCTTAAAGGTGGATCTAATCATCACTGACTACTGCATGCCTGGAATGACCGGCTATGAATTACTCAAGAAAATCAAGGAATCATCCACCTTCAGGGAAATTCCAGTGGTGATCATGTCCTCTGAAAACGTGCTGCCCCGAATAGACAGGTGTTTGGAAGAAGGGGCAGAGGATTTTATAGTGAAACCTGTGAAGTTATCAGATGTGAAGAGGTTAAGAGATTATATGACGACAAGAGAAGTTAAGGTGGGAATTCAGGAGAGAGAAGGCGATGTCAGGTTCACCAAAAGGAAGCTCACGGAATCTTCTGATCTGGATTCATCTCCGCCGTCCATTACTACATCGTCGCCGTCTGAATCTCCGTCCCCGTCGCCGTCGCCGGAGTCGTCACCTTTGCCTTCACCGGCGTCGCTTGATTCTCCGATCAGACGGCTAAGAATGACCACCGCCACTGATTGA 663 0.4781 MEVCDLLPSDSEEVHVLAVDDSLVDRKVIERLLRISACKVTAVDSGIRALQFLGLDNQKSPTESDGFDALKVDLIITDYCMPGMTGYELLKKIKESSTFREIPVVIMSSENVLPRIDRCLEEGAEDFIVKPVKLSDVKRLRDYMTTREVKVGIQEREGDVRFTKRKLTESSDLDSSPPSITTSSPSESPSPSPSPESSPLPSPASLDSPIRRLRMTTATD 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g1290 220 MobiDBLite consensus disorder prediction 163 220 - -
Mibi10g1290 220 SMART REC_2 14 141 IPR001789 GO:0000160
Mibi10g1290 220 CDD REC_typeA_ARR 16 140 - -
Mibi10g1290 220 PANTHER TWO-COMPONENT RESPONSE REGULATOR 14 164 IPR045279 GO:0009736
Mibi10g1290 220 ProSiteProfiles Response regulatory domain profile. 15 145 IPR001789 GO:0000160
Mibi10g1290 220 SUPERFAMILY CheY-like 14 140 IPR011006 -
Mibi10g1290 220 Gene3D - 14 187 - -
Mibi10g1290 220 Pfam Response regulator receiver domain 16 137 IPR001789 GO:0000160
Mibi10g1290 220 MobiDBLite consensus disorder prediction 188 202 - -
Mibi10g1290 220 MobiDBLite consensus disorder prediction 172 187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi10g1290 Mibi-ChrMibi10 32821229 32822289 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi10g1290 8 211 Response Regulator Gene Family AT1G59940 63.981 1.03e-78 237
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Mibi10g1290 Response_reg 2.2e-21 CL0304
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi10g1290 10 32821229 32822289 Mibi13g0644 13 8393868 8395443 ECH
Mibi10g1290 10 32821229 32822289 Mibi10g1290 10 32821229 32822289 ECH