Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g1280 ATGCCTCGCACGTGCTCACAGTGTGGGGCCACCGGGCACAACTGCCGAACATGCTTGGACGGTAACTCCGGCGCCGGCGACAAGAGCATCTTACTGTTTGGAGTGAGAGTGACGGAGGGAAAGTCGTTGAGGAAGAGCGCCAGCATGACCGATCTGTCAAACTACGAAGATCAGCCTCTGCCCCAAGATTCCGGTTACGCCTCCGACGACGTCCTCCACGCTTCCCCTCACACCCGACAGCGAAAGAGAGGTGTTCCATGGACAGAGGAGGAGCATAGGCTATTCCTGTTAGGACTTCAATTAGTAGGGAAGGGTGATTGGAGAGGGATTTCTAGAAACTTCGTCAAAACTCGGACGCCCACTCAGGTGGCAAGTCATGCTCAGAAGTATTTCCTCCGCCGCCATAACAACAGTCGGAGGCGCCGTAGATCTAGTCTCTTTGATATCACCACTGATACGGTGATGGAAATGGATGAGAGGAGGGTACACCAAGAAGCAGTAGTACCGCCGAAATATCCCCATCACTGTGGTGGTTTCGAAGGTTCTGGTTTTCCGATGGGAGCTAAGGTGATAAGGCCGACGGCGAAAATGGCGAATTTAAACTTGAGGGAGGAAGTTCAGGTGGTGGATTCTCTGCCGGCGAGTAGTAAGGAGAAGTCGCAGCTGGGTTTCGAGGTGGTGTCAGGAAACATAAGTGGGGCTAATGATAGCACTAGTATGATCAGTGTTGCTTGA 735 0.5279 MPRTCSQCGATGHNCRTCLDGNSGAGDKSILLFGVRVTEGKSLRKSASMTDLSNYEDQPLPQDSGYASDDVLHASPHTRQRKRGVPWTEEEHRLFLLGLQLVGKGDWRGISRNFVKTRTPTQVASHAQKYFLRRHNNSRRRRRSSLFDITTDTVMEMDERRVHQEAVVPPKYPHHCGGFEGSGFPMGAKVIRPTAKMANLNLREEVQVVDSLPASSKEKSQLGFEVVSGNISGANDSTSMISVA 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g1280 244 ProSiteProfiles Myb-like domain profile. 79 131 IPR001005 -
Mibi10g1280 244 MobiDBLite consensus disorder prediction 46 61 - -
Mibi10g1280 244 MobiDBLite consensus disorder prediction 46 71 - -
Mibi10g1280 244 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 79 135 IPR017930 -
Mibi10g1280 244 SMART sant 83 133 IPR001005 -
Mibi10g1280 244 CDD SANT 86 131 IPR001005 -
Mibi10g1280 244 FunFam transcription factor MYB1R1 85 136 - -
Mibi10g1280 244 SUPERFAMILY Homeodomain-like 80 134 IPR009057 -
Mibi10g1280 244 ProSiteProfiles SANT domain profile. 82 135 IPR017884 -
Mibi10g1280 244 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 82 133 IPR006447 GO:0003677
Mibi10g1280 244 PANTHER TRANSCRIPTION FACTOR KUA1 3 172 - -
Mibi10g1280 244 Pfam Myb-like DNA-binding domain 86 131 IPR001005 -
Mibi10g1280 244 Gene3D - 87 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi10g1280 Mibi-ChrMibi10 32668327 32671818 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Mibi10g1280 Myb_DNA-binding 2.1e-10 CL0123