Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g1269 ATGTCGACAGCCTTGAGAAATTCTCAGAATCGAACGATCGCTGCCACGTGGCGTGAATTGATTAGTAAAGAAAAACTCGCGGCAAAACGCGGAATAATCACTGTTAGGATTTACCAGCGCATTTTCATTTCTTCTTCTTCTTCTTCTTCTTCGGGAATGGATCGAAATTGCAGACCTCCGACTCGAACGAGTCGACTCAGAGGTGTGGAACCTCAGGCCCCTGACAGGCGCACCATTTTCTGCAATAATCGCAACCTCAACCTTCCATGCCCCTTCACGGGAAACTCGATATCAACTACAAAATATAACATGTTCACTTTCTTGCCAAAAGGGCTATTTGAACAGTTCAGGCGGATTGCTAATCTCTATTTTCTTGGAATCTCAATTTTAGCAGCAACACCAATCAGTCCCATATCTCCAATAACTAATGTGGTTCCTCTGTCTGTGGTGCTTCTTATCTCTCTGATTAAGGAAGCTTTTGAGGACTGGAAACGTCATCAAAATGACAACGTCATAAACAATAGAATGATAGATGTTTTGAAAGATCGAACGTGGGAGTCTATAGCCTGGAAAAATCTGCAGGTTGGAGACATTGTCAGGGTTAAGCAGGATGGATTTTTTCCAGCAGATCTGCTATTCCTGGCCAGTACAAATGCAGATGGTGTCTGCTATATTGAGACTGCTAATTTGGATGGGGAAACCAATCTCAAGATCAGGAAAGCATTGGAGAAAACTTGGGATTACCTGACTCCAGAGAAGGCATCTGAGTTTCAAGGTGAAATTCAGTGTGAACAACCAAACAATTCATTGTATACCTTCACTGGAAATCTTATTATTCAATCACAAACACTACCTCTCAGTCCAAACCAAATTTTGCTGCGAGGCTGCAGTGTAAGAAATACAGGGTGTATTGTTGGAGTAGTTATTTTTACAGGGCATGAAACAAAGGTGATGATGAATTCCATGAATGTGCCTTCTAAAAGAAGTACATTGGAGAGGAAGCTTGACAAACTCATACTAGCTATATTTGCAACTCTCTTTGGACTTTGTCTTCTTGGATCCATAGGCAGTGGCTTCTTTGTCAACAACAAATATTTCTATTTACGCCTTGATGAAGGTGGTGAAGGCTCAGCACAATTCAACCCGAGTAATAGATTTCTGGTTATTGTCCTGACTTTTTTAACCCTCATCACTCTATATTCGCCGCTCATCCCTATTTCACTTTATGTGTCAATAGAGACGATCAAATTTATTCAGTCTAATCAATTTATCAACAAGGACTTGTGCATGTACCACAAGGAAACCAATACCCCAGCATTGGCCAGGACCTCTAATCTAAATGAAGAACTTGGGCAGGTGGAATACATCTTCTCCGACAAAACAGGAACTTTAACAAGAAACTTAATGGAGTTTTTTAAGTGTTCCATTGGAGATCAGGTTTATGGAACTGGTGTTACTGAAATTGAGAGGCAAATAGCAGAGCGTAATGGGATGAAAGTTGAGGAAAATAAATCAGACTCTGCAATGCGAGAGAAGGGCTTTAATTTTGATGATGATAGGCTTATGCAAGGAGCTTGGAGGAATGAGCCTCATCCTAACATTTGTAAGGAATTCTTCAGATGCCTTGCTGTATGTCATACTGTTCTTCCTGAGGGCGATGGGTCCCCAGAAAAAATCACATATCAAGCAGCCTCACCTGATGAGGCTGCGTTGGTCATTGCTGCAAAGAACTTTGGTTTCTTCTTTCACAGACGCACACCAACAACAATATATGTTCGCGAATCACATGTTGAAAAGAAGGATCAAGTTCAAGAAATGCCTTATGAAATTTTGAACGTGCTTGAATTTAACAGTACAAGGAAGCGCCAGTCTGTTATATGCCGTTATCCCAATGGGAAGCTTGTATTATACTGTAAGGGTGCTGATACAGTAATCTACGAGAGACTGGCTGATGGCAATGATAATATAAAGAAACTGACCAGAGAGTATTTGGAACAATTTGGAGCTGCTGGGTTACGTACGTTATGCCTGGCCTACAAAGAATTGTCTACACATGTTTACGAAAGTTGGAATGAGAAGTTCATCCAGGCCAAGTCTTCTCTAAGTGATCGTGACAAGAAGTTGGATGAGGTGGCAGAACTTATAGAAACTGATCTGGTTTTGATTGGTAGCACTGCCATAGAGGACAAGCTTCAAGAGGGAGTTCCAGCATGTATAGAGACTCTCCAAAGAGCTGGCATTAAAATTTGGATGCTTACTGGAGACAAGATTGAAACAGCAATAAATATAGCCTATGCATGCAGTTTAATATCCAATGAGATGAAAAAATTTATTATCAGTGCAGAAACTGATGCAATTAGAGAAGTTGAAGAAAGGGGTGACCCAGTGGAAATTACACATTTTATTAGAGAAGCAGTAAAGAAAGAGTTGAAAAAGTCTCTTGAGGAAGCTCAGAGCTACCTTCGCTCTCTAAATGGACAAAAACTAGCACTTGTGATTGATGGGAAAAGTCTGACGTATGCGTTAGACCCAAGTTTAAGAGTGATGCTTCTGAATTTGGGTTTGAATTGTCACGCGGTTGTTTGCTGTCGAGTTTCTCCTTTACAAAAAGCACAGGTCACAAGGTTAGTCAAGAAAGGTGCGCGTAAAATAACACTAAGTATTGGTGATGGAGCCAATGATGTTAGCATGATTCAAGCTGCTCATGTTGGTGTTGGCATAAGTGGAATGGAGGGGATGCAAGCAGTAATGGCTAGTGATTTTGCCATTGCACAGTTTCGTTTCCTTACAGATTTACTACTTGTCCATGGCCGGTGGTCATACCTTCGAATATGCAAGGTTATTACATACTTCTTTTACAAGAATCTCACATTCACTCTTACTCAGTTTTGGTTTACCTTTCAAACGGGATTTTCTGGTCAGAGATTCTATGATGATTGGTATCAGTCATTATATAACGTGATCTTCACTGCACTGCCTGTGATTGCTGTTGGACTATTTGACAAGGATGTCAGTGCATCTCTTTCCAGAAAGTATCCTGGACTTTACAAGGAGGGAGTAAGGAATGCTTTCTTCAAATGGAGTGTTGTGGCAGCATGGGCCATTTTTTCGATCTGCCAGTCTTTGATATTGTTCTATTTTGTGATTTGGTCAAGTTCAGGTGCTAAAAATTCAGCAGGCAAAATATTTGGACACTGGGATGTCAGTACAATGGCCTATACATGTGTTATAGTAACCGTCAATTTACGACTACTTATGATCTGTAATTCGGTTACAAGGTGGCACTTAATTGCTGTTGGTGGAAGTATACTAGCGTGGTTTATTTTCGTCTTCGTATATTCGGCGGTCAGACTGAATGTATATTTTGTGATATATGTCATAATGAGTACATTCTATTTCTACCTCACGCTTCTTCTTGTTCCCATTGCTGCCCTCTTGAGTGACTTTGTCTTTCACGGGATTCAGAGAAGGTTTTTCCCCTATGATTATCAGATTATTCAGGAAATTCACATAGACGAAGCGGAAACCAGCAACAGGACGGAGTTGCTGGAGGTGGGGAATCATTCGCCGCTGTCGGCAAGGAGCTATTCCTTGTCTCAACTGCCTCGCGAGGTATCAAGGCACACAGGCTTTGCATTTGATTCACCTGGCTACGACTCCTTCTTTGCTTCACAGTTTGGTGTGTATGCCCCTCAAAAGGCATGGGATGTTGCTAAACGGGCTAGCAGGTTTCTAGCACCAAAGACTGTCCCCAGAAAATAG 3762 0.4133 MSTALRNSQNRTIAATWRELISKEKLAAKRGIITVRIYQRIFISSSSSSSSGMDRNCRPPTRTSRLRGVEPQAPDRRTIFCNNRNLNLPCPFTGNSISTTKYNMFTFLPKGLFEQFRRIANLYFLGISILAATPISPISPITNVVPLSVVLLISLIKEAFEDWKRHQNDNVINNRMIDVLKDRTWESIAWKNLQVGDIVRVKQDGFFPADLLFLASTNADGVCYIETANLDGETNLKIRKALEKTWDYLTPEKASEFQGEIQCEQPNNSLYTFTGNLIIQSQTLPLSPNQILLRGCSVRNTGCIVGVVIFTGHETKVMMNSMNVPSKRSTLERKLDKLILAIFATLFGLCLLGSIGSGFFVNNKYFYLRLDEGGEGSAQFNPSNRFLVIVLTFLTLITLYSPLIPISLYVSIETIKFIQSNQFINKDLCMYHKETNTPALARTSNLNEELGQVEYIFSDKTGTLTRNLMEFFKCSIGDQVYGTGVTEIERQIAERNGMKVEENKSDSAMREKGFNFDDDRLMQGAWRNEPHPNICKEFFRCLAVCHTVLPEGDGSPEKITYQAASPDEAALVIAAKNFGFFFHRRTPTTIYVRESHVEKKDQVQEMPYEILNVLEFNSTRKRQSVICRYPNGKLVLYCKGADTVIYERLADGNDNIKKLTREYLEQFGAAGLRTLCLAYKELSTHVYESWNEKFIQAKSSLSDRDKKLDEVAELIETDLVLIGSTAIEDKLQEGVPACIETLQRAGIKIWMLTGDKIETAINIAYACSLISNEMKKFIISAETDAIREVEERGDPVEITHFIREAVKKELKKSLEEAQSYLRSLNGQKLALVIDGKSLTYALDPSLRVMLLNLGLNCHAVVCCRVSPLQKAQVTRLVKKGARKITLSIGDGANDVSMIQAAHVGVGISGMEGMQAVMASDFAIAQFRFLTDLLLVHGRWSYLRICKVITYFFYKNLTFTLTQFWFTFQTGFSGQRFYDDWYQSLYNVIFTALPVIAVGLFDKDVSASLSRKYPGLYKEGVRNAFFKWSVVAAWAIFSICQSLILFYFVIWSSSGAKNSAGKIFGHWDVSTMAYTCVIVTVNLRLLMICNSVTRWHLIAVGGSILAWFIFVFVYSAVRLNVYFVIYVIMSTFYFYLTLLLVPIAALLSDFVFHGIQRRFFPYDYQIIQEIHIDEAETSNRTELLEVGNHSPLSARSYSLSQLPREVSRHTGFAFDSPGYDSFFASQFGVYAPQKAWDVAKRASRFLAPKTVPRK 1253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g1269 1253 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 71 1202 - -
Mibi10g1269 1253 Gene3D - 562 697 IPR023299 GO:0000166
Mibi10g1269 1253 Gene3D - 152 324 - -
Mibi10g1269 1253 FunFam Phospholipid-transporting ATPase 565 720 - -
Mibi10g1269 1253 PRINTS P-type cation-transporting ATPase superfamily signature 888 907 - -
Mibi10g1269 1253 PRINTS P-type cation-transporting ATPase superfamily signature 457 471 - -
Mibi10g1269 1253 MobiDBLite consensus disorder prediction 46 70 - -
Mibi10g1269 1253 ProSitePatterns E1-E2 ATPases phosphorylation site. 459 465 IPR018303 -
Mibi10g1269 1253 CDD P-type_ATPase_APLT_Dnf-like 94 1048 - -
Mibi10g1269 1253 SFLD p-type atpase 439 939 IPR044492 -
Mibi10g1269 1253 FunFam Phospholipid-transporting ATPase 153 322 - -
Mibi10g1269 1253 Gene3D - 718 928 IPR023214 -
Mibi10g1269 1253 Pfam Phospholipid-translocating ATPase N-terminal 79 143 IPR032631 -
Mibi10g1269 1253 SFLD Haloacid Dehalogenase 439 939 - -
Mibi10g1269 1253 Pfam E1-E2 ATPase 175 366 - -
Mibi10g1269 1253 SUPERFAMILY Calcium ATPase, transmembrane domain M 94 1160 IPR023298 -
Mibi10g1269 1253 Coils Coil 807 827 - -
Mibi10g1269 1253 Pfam Phospholipid-translocating P-type ATPase C-terminal 916 1160 IPR032630 -
Mibi10g1269 1253 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 92 1168 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Mibi10g1269 1253 Pfam Cation transport ATPase (P-type) 556 648 - -
Mibi10g1269 1253 SUPERFAMILY Calcium ATPase, transduction domain A 174 318 IPR008250 -
Mibi10g1269 1253 FunFam Phospholipid-transporting ATPase 721 928 - -
Mibi10g1269 1253 SUPERFAMILY HAD-like 714 936 IPR036412 -
Mibi10g1269 1253 FunFam Phospholipid-transporting ATPase IC 454 466 - -
Mibi10g1269 1253 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 463 735 IPR023299 GO:0000166
Mibi10g1269 1253 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 861 967 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi10g1269 Mibi-ChrMibi10 32558136 32571290 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi10g1269 43 1253 Primary Pumps ATPases AT1G59820 72.847 0.0 1883