Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g1252 ATGAGGCTGGCAGGCCCCCACCAAGTCCGTCTCCCAAGTGGCCCCTCTTGTCCTCACATCTCTGCTGCACGTGACCACTTCTCTCCTTTCAAACTCACCTTCCCTCTTCCACTTACTTCACTCCCTCTCTCTCTCTCACCATTCACATTTTCAGATCTCATTCTCTGTTCTCTCATTCCACTTTCTACACTTCATGATCCCCCATCCATGTCTCCTCCTTCAACCTTCCCCATTCCTTTCTTGACTCTCTCCTTCATCTTCTGCTTCCTATCTCATCTTCCTTCTTCTCACTCTCACACTTGCTCTTCTCACCCACATACACCTTCTCTTTGCCCTCCTTTCTCTTCACACCCTCCTTTCCCTTTCTCTTTCTCCCCAGGCTGTGGCCACCCTTCCTTCCAAATCCAATGCTCTCTCCCCTACTCTCTCATCTCCATTAACAACTTCACTTTCTCTGTTCTCAACTATAACCCCAATACCTCTTCTCTCACCCTTTTGCCTCGTCTTGATAATAATGCCTCTCACCAAAATGCCTCTTCTGCCCACAAAAATTGCTCCACTCCTCTCTTCCTTTCTATTCTTAACCACTCCATTGATCTCTCTGGTTCTCCTTTCAGATTCTCTGATAGCATCTGCTCTCGCCTTTCTGATATCCAACCTTGCAAGCCCCCTTCTCTACCAAATTGTAGCCACTGTCCATGGGAATGTAGACTCATAAAGAACCCATCTTTTCTCCTCCAAGATTGTGGATCTGCTCATCACTCAGTTTCAGACTTAGAAAATCGCTGCGAAAGTGATGTTTTGGGTTATATCGACATTATACTTGCTCGTGGGATCGAAGTTGAGTGGGATGAAACTCAAGATCCTTACTTTTCCAGCTGCAGAAACTGCACCTCAAGAAGTGGACTCTGTGGATTCAATTCATCAGACCCACATAACCAGTTCATGTGCCTTCACTCCAAATCCGAATCTAGCTTCTCTCCTGGTTGGATTCAAAGTGTGAATCCCAAGCGTAACACAGTTTTATCCCTTGTAGTTCCTTTAATGTTGCTACTTCTTTTTGTCTCTGTCGTTACTGCAATTTTCCGTTCAAGGAGATTCAATTCATCAAAAACAGAAGAAGACCCAACAATCCTTTTTCTTCATAACCAACGATCCGCAAGCCTTCTCCCTCCTGTGTTCACCTATGAGGAATTAGAGACAGCCACAAACCGGTTCGACCCGAAACGCAAAATCGGCGATGGCGGGTTCGGGTCGGTTTATCTGGGTCAACTTCACGATACAAGAATCGTCGCAGTGAAATACCTCCATAAGCAACATACAGAGGCCACCAAATCAGGAAGAGCTTTATCCACAAAATCATTCTGCAACGAAATTTTGATACTTTCTTCCTTAAACCACCCGAATCTAGTCAAACTTCATGGATATTGCAGTGACCCGAGAGGTTTACTTCTTGTTTATGACTATGTCCCAAATGGAACTCTCGCAGAACATCTTCATGGTCCCAAGAGTTCATTCAGAAAAGGGTCTCTCACTTGGCAAGTAAGGCTAGATATTGCTTTACAAACAGCATTAGCCATGGAGTATCTTCACTGTTCTGTTGTGCCACCTATAGTTCACAGAGACATAACTTCGTCTAATATCTTTGTGGAGAGAGATATGGGGATTAAAGTTGGAGACTTTGGGCTTTCTAGGCTATTGATTTTGCAGGATACATCGTCTTCTTCAACTGGGTATGTCTGGACTGGTCCTCAAGGTACACCTGGGTATTTGGATCCGGATTATCACAGGTCGTTTAGGTTAACGGAAAAGAGTGATGTGTATAGTTTTGGGGTGGTTTTGCTTGAGCTGATTTCTGGGTTGAAGGCGGTGGATCAGAGTAGGGACAAGAGAGAAGTTGCTTTGGCTGATTTGGTTGTTTCTAGGATCCATATGGGTCAGTTGAATCAAGTGGTGGACCCCATTTTGGCTAAGGAGGAGGAAGTTATGGACGCCGTCGCCGCCGTTGCTGAGCTGGCTTTCCGGTGTGTGGCGGCGGAGAAAGATGACCGGCCGGATTCGAAGGAGGTGGTGGAGCAGCTGAAAAGGGTACGGCTCTCTGGTCTCCGGTCGCCCTCAAATTCTCAAGCCGGTGGTGCTGACGTGGCGAGATATATGTGA 2160 0.4616 MRLAGPHQVRLPSGPSCPHISAARDHFSPFKLTFPLPLTSLPLSLSPFTFSDLILCSLIPLSTLHDPPSMSPPSTFPIPFLTLSFIFCFLSHLPSSHSHTCSSHPHTPSLCPPFSSHPPFPFSFSPGCGHPSFQIQCSLPYSLISINNFTFSVLNYNPNTSSLTLLPRLDNNASHQNASSAHKNCSTPLFLSILNHSIDLSGSPFRFSDSICSRLSDIQPCKPPSLPNCSHCPWECRLIKNPSFLLQDCGSAHHSVSDLENRCESDVLGYIDIILARGIEVEWDETQDPYFSSCRNCTSRSGLCGFNSSDPHNQFMCLHSKSESSFSPGWIQSVNPKRNTVLSLVVPLMLLLLFVSVVTAIFRSRRFNSSKTEEDPTILFLHNQRSASLLPPVFTYEELETATNRFDPKRKIGDGGFGSVYLGQLHDTRIVAVKYLHKQHTEATKSGRALSTKSFCNEILILSSLNHPNLVKLHGYCSDPRGLLLVYDYVPNGTLAEHLHGPKSSFRKGSLTWQVRLDIALQTALAMEYLHCSVVPPIVHRDITSSNIFVERDMGIKVGDFGLSRLLILQDTSSSSTGYVWTGPQGTPGYLDPDYHRSFRLTEKSDVYSFGVVLLELISGLKAVDQSRDKREVALADLVVSRIHMGQLNQVVDPILAKEEEVMDAVAAVAELAFRCVAAEKDDRPDSKEVVEQLKRVRLSGLRSPSNSQAGGADVARYM 719
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g1252 719 Gene3D Transferase(Phosphotransferase) domain 1 490 708 - -
Mibi10g1252 719 SUPERFAMILY Protein kinase-like (PK-like) 387 694 IPR011009 -
Mibi10g1252 719 Pfam Protein kinase domain 408 692 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi10g1252 719 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 82 705 IPR044652 GO:0004672
Mibi10g1252 719 CDD STKc_IRAK 412 696 - -
Mibi10g1252 719 ProSitePatterns Protein kinases ATP-binding region signature. 412 434 IPR017441 GO:0005524
Mibi10g1252 719 FunFam Putative serine/threonine-protein kinase At1g18390 family 382 489 - -
Mibi10g1252 719 Gene3D Phosphorylase Kinase; domain 1 382 489 - -
Mibi10g1252 719 ProSitePatterns Tyrosine protein kinases specific active-site signature. 538 550 IPR008266 GO:0004672|GO:0006468
Mibi10g1252 719 ProSiteProfiles Protein kinase domain profile. 406 699 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi10g1252 Mibi-ChrMibi10 32377106 32379265 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi10g1252 111 717 Receptor kinase-like Gene Family AT1G69910 61.600 0.0 719
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Mibi10g1252 Pkinase 7.6e-43 CL0016