Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g1241 ATGGGTGCTAGCGACTACTACAGGATCCTCAAGGTGAATCGAAATGCGACAGACGAGGAGCTCAAGAAGGCGTACAAGAGATTGGCTATGAAATGGCATCCAGACAAGAATCATCAACAACAATCTGTGAACAAAGAGGACGCTGAGGCTAAATTCAAGCAGATTTCTGAGGCTTATGATGTTCTCAGCGATCCTAAGAAGCGTCAGATCTATGATTTTTACGGTCATTATCCGCTCAATTCTAATCGTGTTGATAAGAAAGATGGTAAGAATGATGAAATTGGGAGCCAGAAGGAGGAGAAGAAGAAGGTTGGGGCTATTGAGAGTAAACTTGCTTTTAGCCTCGAGGAACTTTACAGAGGTAGCAAACGGAAGATGAAAGTCTCCAGGAATGTTCCTGATGAATTCGGGAAGTTGAACACTGTTGAAGAAATCTTAAAGATTGATATTAAACCTGGCTGGAAGAAGGGCACAAAAATAACTTTTCCTGGGAAAGGCCACCAAGAACCAGGATGTGCACCAGCAGATCTAATCTTTGTGGTCGACGAGAAACCTCATCCATTTTACAAGAGAGAAGGGAATGATTTGATTCTCATCCAGAAGATATTACTTCTTGAGGCTCTCGTTGGAAAGACCCTGAACCTGAAAACATTGGATGGAAGAGACCTTACAATTCAAGTGAAGGAGATTGTTGAACCAGGATACGAGCTGGTGCTCCCAAATGAAGGAATGCCCATTTCAAAGGAACCAGGAAAGAAGGGGAAACTAAGAATTAAGTTTGATGTTATGTTTCCTTCAAGGCTGACCACACAACAAAAGTATGAACTAAAAAGGATTCTGAACGATGCTGATAACTAA 858 0.4184 MGASDYYRILKVNRNATDEELKKAYKRLAMKWHPDKNHQQQSVNKEDAEAKFKQISEAYDVLSDPKKRQIYDFYGHYPLNSNRVDKKDGKNDEIGSQKEEKKKVGAIESKLAFSLEELYRGSKRKMKVSRNVPDEFGKLNTVEEILKIDIKPGWKKGTKITFPGKGHQEPGCAPADLIFVVDEKPHPFYKREGNDLILIQKILLLEALVGKTLNLKTLDGRDLTIQVKEIVEPGYELVLPNEGMPISKEPGKKGKLRIKFDVMFPSRLTTQQKYELKRILNDADN 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g1241 285 ProSitePatterns Nt-dnaJ domain signature. 52 71 IPR018253 -
Mibi10g1241 285 Pfam DnaJ C terminal domain 107 265 IPR002939 -
Mibi10g1241 285 FunFam DNAJ heat shock family protein 185 280 - -
Mibi10g1241 285 SUPERFAMILY HSP40/DnaJ peptide-binding domain 189 273 IPR008971 GO:0006457|GO:0051082
Mibi10g1241 285 Pfam DnaJ domain 5 72 IPR001623 -
Mibi10g1241 285 Gene3D - 105 184 - -
Mibi10g1241 285 CDD DnaJ 5 64 IPR001623 -
Mibi10g1241 285 FunFam Dnaj homolog subfamily b member 103 184 - -
Mibi10g1241 285 ProSiteProfiles dnaJ domain profile. 5 75 IPR001623 -
Mibi10g1241 285 SUPERFAMILY Chaperone J-domain 3 80 IPR036869 -
Mibi10g1241 285 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 1 280 - -
Mibi10g1241 285 Gene3D - 186 266 - -
Mibi10g1241 285 SUPERFAMILY HSP40/DnaJ peptide-binding domain 107 197 IPR008971 GO:0006457|GO:0051082
Mibi10g1241 285 MobiDBLite consensus disorder prediction 82 101 - -
Mibi10g1241 285 SMART dnaj_3 4 67 IPR001623 -
Mibi10g1241 285 PRINTS DnaJ domain signature 47 67 IPR001623 -
Mibi10g1241 285 PRINTS DnaJ domain signature 25 40 IPR001623 -
Mibi10g1241 285 PRINTS DnaJ domain signature 67 86 IPR001623 -
Mibi10g1241 285 PRINTS DnaJ domain signature 7 25 IPR001623 -
Mibi10g1241 285 Gene3D DnaJ domain 1 100 IPR036869 -
Mibi10g1241 285 CDD DnaJ_C 107 268 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi10g1241 Mibi-ChrMibi10 32218992 32221092 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi10g1241 6 74 C2H2 Transcription Factor Family AT1G74250 36.232 3.73e-11 61.6