Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g1232 ATGGCTGGTCCTAATAAGCTTTTTGCTCCCTCAAATTTCACAGCTTTTCTCCAAAACGAAAGCTTTCCTTCTTCCTCTCCTTCCCCTCATGTTCTTGACTCTTTTTTGCTTCACCACCACTCTGACCCCTCCTCCTTTCAAGGTTCAAAACACCTGGTTGATTTCGAGAATGTTAGTGGAAGCACAGTAACAGAATTGCCATTCTTCCAAGGTCTGGACAAAGAAGATCAGAACAACACTGAAGAAGATGAATACGATGCTTGCTTTCACCAGCCAGGAAAAAAGAGGAGGCTCACAGGCCAACAAGTTCAGTTCTTAGAGAAGAACTTCGAAGTAGAAAACAAGCTTGAACCAGAAAGAAAAGTCCAACTCGCTAAAGAACTTGGTTTACAGCCAAGGCAAGTTGCTATTTGGTTTCAGAACCGAAGAGCCAGGTTCAAAACCAAACAGCTTGAAAAAGATTATACAACCTTAAAAGCCAGCTATGACAAACTCAAAGGTGACTATGAAAATATTATTCACCAGAATGACAAGTTAAAAGAAGAGGTGAATTCTCTGAAGAACAGGTTGAAAGGGAGGGATATAGATAAAGAGAAAGGGGATAACTATGAGAAGTGTGTGGATGTAGTGATCTCACATAATGATGGGGTTTCTAAGAATGGGTCAAAAGTTGAAAAGGTTGATACAGTGATGTGCAAACAAGAAGATGCCAATTCTGTTAAAAGTGATGTGTTTGATTCTTCTGATAGCCCACACCATACTGCAGATTCGTCCCACCATGCATATGAAGCAGAGCACTCTGATTTCTCACAGGATGAAGAAGATAACAACAATCTCTTGAGTCTCCCACCATGCTTATTACCAAAGGTTGAAGAAGAGCCTTGTAACTTTGGATTCCCTTATGAAGATCAACCTTTCTGTTTTTGGTCTTATTAA 936 0.4028 MAGPNKLFAPSNFTAFLQNESFPSSSPSPHVLDSFLLHHHSDPSSFQGSKHLVDFENVSGSTVTELPFFQGLDKEDQNNTEEDEYDACFHQPGKKRRLTGQQVQFLEKNFEVENKLEPERKVQLAKELGLQPRQVAIWFQNRRARFKTKQLEKDYTTLKASYDKLKGDYENIIHQNDKLKEEVNSLKNRLKGRDIDKEKGDNYEKCVDVVISHNDGVSKNGSKVEKVDTVMCKQEDANSVKSDVFDSSDSPHHTADSSHHAYEAEHSDFSQDEEDNNNLLSLPPCLLPKVEEEPCNFGFPYEDQPFCFWSY 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g1232 311 Gene3D - 87 156 - -
Mibi10g1232 311 Pfam Homeobox associated leucine zipper 149 190 IPR003106 GO:0006355|GO:0043565
Mibi10g1232 311 Coils Coil 162 196 - -
Mibi10g1232 311 MobiDBLite consensus disorder prediction 241 275 - -
Mibi10g1232 311 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 73 253 IPR045224 GO:0003700
Mibi10g1232 311 ProSitePatterns 'Homeobox' domain signature. 124 147 IPR017970 GO:0000981|GO:0006355
Mibi10g1232 311 MobiDBLite consensus disorder prediction 241 273 - -
Mibi10g1232 311 Pfam Homeodomain 94 147 IPR001356 GO:0003677
Mibi10g1232 311 PRINTS Lambda-repressor HTH signature 120 129 IPR000047 GO:0003677
Mibi10g1232 311 PRINTS Lambda-repressor HTH signature 129 145 IPR000047 GO:0003677
Mibi10g1232 311 ProSiteProfiles 'Homeobox' domain profile. 89 149 IPR001356 GO:0003677
Mibi10g1232 311 SUPERFAMILY Homeodomain-like 85 151 IPR009057 -
Mibi10g1232 311 CDD homeodomain 92 150 IPR001356 GO:0003677
Mibi10g1232 311 FunFam homeobox-leucine zipper protein ATHB-6-like 97 143 - -
Mibi10g1232 311 SMART HOX_1 91 153 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi10g1232 Mibi-ChrMibi10 32095515 32096707 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi10g1232 92 193 Homeobox Transcription Factor Family AT3G01470 67.647 4.15e-44 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Mibi10g1232 Homeodomain 5.8e-16 CL0123