Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g1224 ATGCCACTCATGCATGCACCTGCACATTTTCTATCCATCTCTGGTCTTTCATGGTTTAATTTTGGGAATTTATCATCTGCGCTTGAAGCTTATTTGCTGCTTGTTGTTGTGCTGGGAGGGGGGAAATTATTGGAGGGGGTGATGGGGTTGGGTGCTGACAATGAAAAGGTGGAGTCTTTGGATGTAAGCAAATCAAAGGGGACGAAGAAGAAGAAGAAAGATGGTGGAGTTTTGGAAGAGGAAGAAACTGGGTGTTGGGTTGGGCTGAGATTTTTTGGCAGTTGCATTTCTTCGAGATCCAAGGTTGATAGCTCAGTTAGCAGCATCAGCACTCATTATGCTGAAAGTAAATCAACTGTTGGTACAAGTAGAGATCAGCCAACAGCTCCAGTAGTACCTTCTACATCCACGAGTAACGCTGAAAGTAATTCATCCACCTCCAAACTCGAAGAGGAGCTTAAAATTGCTTCCAGGCTGCGAAAGTTCTCATTTAATGATCTTAAGTTGGCGACAAGAAACTTCCGGCCTGAGAGTCTTCTTGGTGAAGGTGGGTTTGGTTGTGTGTTCAAGGGATGGATTGAAGAAAATGGAACTGCCCCAGTGAAACCTGGCACAGGGCTTACAGTTGCTGTAAAAACCCTCAATCATGATGGACTACAGGGTCATAAAGAATGGCTGTTTGTTGGGATTATATCCTTGTTTGATATAGGATCCCTGCCGCTTCCGTGGTCCATCAGAATGAAAATTGCACTGGGAGCTGCAAAGGGTCTGGCATTTCTTCATGAGGAAGCTGAACGACCAGTAATATATAGAGATTTTAAAACTTCCAATATACTACTAGATGCTGAGTACAATGCCAAACTTTCGGATTTTGGACTTGCCAAAGATGGTCCGGAGGGTGATAAAAGTCATGTATCCACCCGGGTGATGGGAACCTATGGTTATGCAGCACCTGAATATGTCATGACAGGTCATCTTACATCAAAAAGTGATGTGTACAGTTTTGGAGTAGTTCTTCTTGAGATGTTGACTGGCAGAAGATCTATGGACAAAAACCGACCTAATGGTGAACATAACCTTGTTGAATGGGCTCGGCCACATCTCGGAGAGAGAAGAAGGTTCTATAGGTTGATAGATCCTCGGTTAGAAGGTCACTTTTCCATAAAAGGAGCTCAAAAAGCTGCCCAACTGGCTGCCCACTGCCTTAGCAGAGATCCAAAAGCCAGACCCCTAATGAGTGAAGTTGTGGAAGCCTTAAAGCCTCTGCCAAACCTTAAGGACATGGCGAGCTCATCATATTATTTTCAGACAATGCAAGCTGACCGATTTGGTGCGAGCCCTAATACTCGAAATGGGCGTACACTGCTTTCCCGAAATGGGCAGCAGCAGAGGAGCCTTTCTATACCTCATGGTTCTCATGCATCTCCTTATCACCATCAGTTTCCCCTACAATCCCCTAAACCTAATGGCAAAGCATAG 1479 0.4476 MPLMHAPAHFLSISGLSWFNFGNLSSALEAYLLLVVVLGGGKLLEGVMGLGADNEKVESLDVSKSKGTKKKKKDGGVLEEEETGCWVGLRFFGSCISSRSKVDSSVSSISTHYAESKSTVGTSRDQPTAPVVPSTSTSNAESNSSTSKLEEELKIASRLRKFSFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLFVGIISLFDIGSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAEYNAKLSDFGLAKDGPEGDKSHVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPLPNLKDMASSSYYFQTMQADRFGASPNTRNGRTLLSRNGQQQRSLSIPHGSHASPYHHQFPLQSPKPNGKA 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g1224 492 MobiDBLite consensus disorder prediction 443 492 - -
Mibi10g1224 492 Gene3D Phosphorylase Kinase; domain 1 158 232 - -
Mibi10g1224 492 SUPERFAMILY Protein kinase-like (PK-like) 158 435 IPR011009 -
Mibi10g1224 492 ProSitePatterns Protein kinases ATP-binding region signature. 180 212 IPR017441 GO:0005524
Mibi10g1224 492 MobiDBLite consensus disorder prediction 443 470 - -
Mibi10g1224 492 MobiDBLite consensus disorder prediction 116 146 - -
Mibi10g1224 492 PANTHER OS01G0588500 PROTEIN-RELATED 138 226 - -
Mibi10g1224 492 Pfam Protein kinase domain 248 417 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi10g1224 492 Gene3D Transferase(Phosphotransferase) domain 1 233 440 - -
Mibi10g1224 492 MobiDBLite consensus disorder prediction 116 147 - -
Mibi10g1224 492 ProSiteProfiles Protein kinase domain profile. 81 425 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi10g1224 492 FunFam Probable serine/threonine-protein kinase PBL8 231 440 - -
Mibi10g1224 492 ProSitePatterns Serine/Threonine protein kinases active-site signature. 268 280 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi10g1224 Mibi-ChrMibi10 31981068 31987231 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi10g1224 122 419 Glycoside Hydrolase AT3G07070 47.774 3.62e-93 287
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Mibi10g1224 Pkinase 5.5e-29 CL0016