Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g1220 ATGGAGGTGGCTTCTTTGAAATGTGAAGTGGGCCAAACAAGGCATAGGTCTTACATGATGGATGGTGGTGAGGGTGATGCTAGTAACTGCGGCAAAAGGAGGCGAAGAGATTCTTCATTGGCCATCTTAGAAGCCAATGAACAGTCACAAGAACGGCAGCCACAGGGTGACAGATCAACCACCACTACCACCGTAAAGAGAAGCTCGAGATTTCGGGGAGTTAGCAGACATAGGTGGACAGGAAGGTTTGAGGCTCACCTATGGGATAAAGGAACATGGAATCCAACTCAGAAAAAGAAAGGGAAGCAAGGGGCTTATACTGATGAAGAAGCAGCTGCTAGAGCTTATGACTTAGCTGCATTAAAGTATTGGGGAACTTCAACTTTCACAAATTTCCCTGTGTCTGAGTATGAGAAAGAGATTGAGATCATGAAAACTGTAACCAAAGAAGAATACCTTGCTTCATTAAGAAGGAGGAGCAGTGGTTTTTCTAGAGGTGTATCAAAGTACAGAGGAGTAGCAAGACACCATCACAATGGCAGATGGGAAGCAAGGATAGGGAGAGTATTTGGCAACAAGTACCTCTACCTTGGGACTTACAGTACACAAGAAGAGGCTGCTCGTGCATACGACATTGCGGCGATTGAGTACAGAGGCATACATGCGGTGACAAATTTTGACTTGAGCACATACATCAGATGGCTAAGACCTGTAGCACCTTCTTCTTCTTCTTTACCAGTGGAAAAGCCAAACACAGATCCTCAGAACAAGACAACCTCATGCCTTGTCCCAACAGAAGGAACAACTGAGGCAGCCAACTTCATCCTCCATCCATTCCCAGCTGGTGATTCTGACAGTACAATGAAGCAAGTCAGTTCACAATACATGAGCTCTCTAAGTGCCTTCAATAACAAGTCATCTTCCCCAACAGCACTAGGGATTCTCCTGAAATCCTCAGTATTTAGAGAGCTGATGCAGAAGAATCTGAATTCTGCTAATGAAGATTCAGAAGAAAGTGAATTCAAGATCCCACCACAAGAAGGCAGCGATGGGCTTGGAGTGGCTTTTGATCATAGAATTGCAAGTAACTCTTTCTTGTGCCCGTCCACTGATAATAGCAGATTTTGCATGGAGTCACTAGAAGAAAGCACATGGCCATTGTATCATAGAACCAGGCAATCACTATGGAGTGGTGCTTTAAACTGA 1206 0.4461 MEVASLKCEVGQTRHRSYMMDGGEGDASNCGKRRRRDSSLAILEANEQSQERQPQGDRSTTTTTVKRSSRFRGVSRHRWTGRFEAHLWDKGTWNPTQKKKGKQGAYTDEEAAARAYDLAALKYWGTSTFTNFPVSEYEKEIEIMKTVTKEEYLASLRRRSSGFSRGVSKYRGVARHHHNGRWEARIGRVFGNKYLYLGTYSTQEEAARAYDIAAIEYRGIHAVTNFDLSTYIRWLRPVAPSSSSLPVEKPNTDPQNKTTSCLVPTEGTTEAANFILHPFPAGDSDSTMKQVSSQYMSSLSAFNNKSSSPTALGILLKSSVFRELMQKNLNSANEDSEESEFKIPPQEGSDGLGVAFDHRIASNSFLCPSTDNSRFCMESLEESTWPLYHRTRQSLWSGALN 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g1220 401 Gene3D AP2/ERF domain 168 229 IPR036955 GO:0003700|GO:0006355
Mibi10g1220 401 Gene3D AP2/ERF domain 69 135 IPR036955 GO:0003700|GO:0006355
Mibi10g1220 401 SUPERFAMILY DNA-binding domain 168 229 IPR016177 GO:0003677
Mibi10g1220 401 MobiDBLite consensus disorder prediction 17 71 - -
Mibi10g1220 401 PRINTS Ethylene responsive element binding protein signature 209 229 IPR001471 GO:0003700|GO:0006355
Mibi10g1220 401 PRINTS Ethylene responsive element binding protein signature 71 82 IPR001471 GO:0003700|GO:0006355
Mibi10g1220 401 MobiDBLite consensus disorder prediction 42 69 - -
Mibi10g1220 401 SMART rav1_2 169 233 IPR001471 GO:0003700|GO:0006355
Mibi10g1220 401 SMART rav1_2 70 139 IPR001471 GO:0003700|GO:0006355
Mibi10g1220 401 ProSiteProfiles AP2/ERF domain profile. 70 133 IPR001471 GO:0003700|GO:0006355
Mibi10g1220 401 MobiDBLite consensus disorder prediction 241 261 - -
Mibi10g1220 401 MobiDBLite consensus disorder prediction 244 261 - -
Mibi10g1220 401 SUPERFAMILY DNA-binding domain 69 135 IPR016177 GO:0003677
Mibi10g1220 401 CDD AP2 168 229 IPR001471 GO:0003700|GO:0006355
Mibi10g1220 401 ProSiteProfiles AP2/ERF domain profile. 169 227 IPR001471 GO:0003700|GO:0006355
Mibi10g1220 401 Pfam AP2 domain 168 219 IPR001471 GO:0003700|GO:0006355
Mibi10g1220 401 Pfam AP2 domain 69 125 IPR001471 GO:0003700|GO:0006355
Mibi10g1220 401 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 48 297 - -
Mibi10g1220 401 FunFam AP2-like ethylene-responsive transcription factor 168 229 - -
Mibi10g1220 401 MobiDBLite consensus disorder prediction 27 41 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi10g1220 Mibi-ChrMibi10 31943748 31946380 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi10g1220 66 266 AP2-EREBP Transcription Factor Family AT5G57390 59.135 5.31e-78 246
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Mibi10g1220 AP2 1.5e-07 CL0081