Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g1218 ATGCTCAATCAATCCCCGAGGTTTTTTCCCAGCCACAAGCATCATCCCATGAGTCAGACGCCACATAATTCGACACGTCAGCTGCTTGCAGTCAATGATGAGTTGATGACTGTGTCTGACAACATCGCCATTAATGCGCATGATGACTGGAACGCATGGACTATACTGTTGTCAGTCACCAGTCACCAGTCACCAGCACCAAATGTTGTTTCTCTCATGATTTCCTATGAAATCTGCTCCTCCCGGGCTCCATTTCAAGTCCTGAGTTTCTCTACATGGAGGCGAACGAACACGCAGTTCTTGATTTTCCTCCCTTCCAAAACCAAGATTAGCTTCTTCCCATGCATTGCTTGTAGCGATAACTCCTTTTCCTTGCCACCCCCAAAACAGCTGGGTTATGGTCCTCCTGAGGAATTGTTCGGTCTCGATGTAGAACTCAAGCCCAACAATGGCAGCTCTCAAACATCGGAAACCAGATCGTGGGTTGGTCCGAGTGGACAATACATCAGAGAGTTACCTTGTCCAAGCTGCCGGGGAAGGGGTTATACTCCTTGTACAGAGTGCGGAATTGAAAGATCAAGACCAGACTGTCCAAAGTGTAGTGGGAAGGGTATTGTTACTTGCCACCAGTGTTCAGGAGCTCGTGTTACTTGGGAAGAATCAATTGATGAAAGACCATGGGAAAGAGCACGTTCCATTTCCCCTCTCAAAGTGAAGGAAGATGATGAAGTTGATAATTTAGACATAGAGCTGAATGTGAAGAAAAAATCGAAGCGTATTTACCAGTCACCGCCACCTGAAGTTGGATTAAAAATTAGTCGCTCATTGAAAGATCTCAATGCAAAAACTGGTCTGTTTAGCAAGAGAATGAAGATTATCCATCGTGATCCTAAGCTTCGTGCGCAGAGAGTAGCTGCAATTAAGAAATCCAAGGGAACTGATGCAGCTAGAAAGCACACCTCTGAAACTATGAAAGCTTTCTTTAGTAACCCAGAAAATCGCCATAAAAGGAGCATTGCCATGAAAGGAGTGAATTTCTTCTGCCGAAACTGTGGAAGGGAAGGCCATAGGAGACACTACTGTCCAGAACTGAAGGATAGTTTGGTGGATGGGCGATTCAAGTGCCGGCTATGTGGGGAAAAAGGCCATAACAGAAGAACATGCAGCAAGTTAAGGATAGTCCATCGAAACGGCAGGCTTGTTAAGCTACATCGATGCAAAATATGTCGTCAATATGGCCACAATCGCAGGACCTGCAGCGCTCAGTTAGCTGCTGCCTCCAGAACGACAGCTTCTACAAGGCCATACAAGTGTCGTTTGTGCCACGAGAATGGACACAATATCAGGACATGTCCTAGTACATCAGCTGTTAGTAGCACTCAACATGCTCAAGATTAA 1398 0.4578 MLNQSPRFFPSHKHHPMSQTPHNSTRQLLAVNDELMTVSDNIAINAHDDWNAWTILLSVTSHQSPAPNVVSLMISYEICSSRAPFQVLSFSTWRRTNTQFLIFLPSKTKISFFPCIACSDNSFSLPPPKQLGYGPPEELFGLDVELKPNNGSSQTSETRSWVGPSGQYIRELPCPSCRGRGYTPCTECGIERSRPDCPKCSGKGIVTCHQCSGARVTWEESIDERPWERARSISPLKVKEDDEVDNLDIELNVKKKSKRIYQSPPPEVGLKISRSLKDLNAKTGLFSKRMKIIHRDPKLRAQRVAAIKKSKGTDAARKHTSETMKAFFSNPENRHKRSIAMKGVNFFCRNCGREGHRRHYCPELKDSLVDGRFKCRLCGEKGHNRRTCSKLRIVHRNGRLVKLHRCKICRQYGHNRRTCSAQLAAASRTTASTRPYKCRLCHENGHNIRTCPSTSAVSSTQHAQD 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g1218 465 Pfam Zinc knuckle 435 452 IPR025829 -
Mibi10g1218 465 PANTHER ZINC FINGER CCHC DOMAIN CONTAINING PROTEIN 149 389 - -
Mibi10g1218 465 SUPERFAMILY Retrovirus zinc finger-like domains 345 390 IPR036875 GO:0003676|GO:0008270
Mibi10g1218 465 ProSiteProfiles Zinc finger CCHC-type profile. 374 390 IPR001878 GO:0003676|GO:0008270
Mibi10g1218 465 SMART c2hcfinal6 405 421 IPR001878 GO:0003676|GO:0008270
Mibi10g1218 465 SMART c2hcfinal6 374 390 IPR001878 GO:0003676|GO:0008270
Mibi10g1218 465 SMART c2hcfinal6 437 453 IPR001878 GO:0003676|GO:0008270
Mibi10g1218 465 SMART c2hcfinal6 347 363 IPR001878 GO:0003676|GO:0008270
Mibi10g1218 465 ProSiteProfiles Zinc finger CCHC-type profile. 348 363 IPR001878 GO:0003676|GO:0008270
Mibi10g1218 465 SUPERFAMILY Retrovirus zinc finger-like domains 399 454 IPR036875 GO:0003676|GO:0008270
Mibi10g1218 465 MobiDBLite consensus disorder prediction 1 22 - -
Mibi10g1218 465 Gene3D - 344 391 - -
Mibi10g1218 465 Gene3D - 401 464 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi10g1218 78 459 C2H2 Transcription Factor Family AT5G20220 58.065 8.93e-155 444