Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g1217 ATGTCCCAGCTTCACTCTCTGTCTTCATCTTCTTCTTCCCCACTCACCACACCATATTCATTTCAACTCTGCCCTCCCCACAGTTTCTATCCAAAAAAGTCTCTTTCTTTTTGCCCTTCTTCAACCTCCCATGGCTTCAACTTCTCCCTCACCCTCCCATCTTCCTCTCGCACAAACCCTTTTTCTATCAAATGCCGCCAATCCGAGTACTTCCAACAACCAAGCTTCACCAAACCCATCAGAAATGCAAACGGAAACGATTCAGTTGGAGCTCTGCCGCCTAGGGTTTATGTGGGCCACTCGGTTTACAAAGGGAAGGCTGCGCTTACTGTAACTCCCAGGCCTCCAGAGTTTGCCTCATTGGAATCAGGGGCATTCAAAGTATCTCGGGAAGGTTATGTGCTGCTTCAGTTCGCTCCTGCAGTTGGTATGCGCCAGTATGACTGGAACAGAAAGCAGGTATTCTCTCTATCAGTGGGTGAAATGGGAAATATAATTAGCCTTGGTGCAAGGGATTCGTGTGAATTTTTTCATGATCCTTTTAAGGGGAAGAGTGATGAAGGTCAAGTCAGAAAAGTTTTAAAAGTGGAGCCACTTCCAGATGGTTCTGGTCACTTTTTTAACCTAAGTGTTCAAAACAAGATTGAGAACGTGGATGAAAGCATCTATATCCCTATTACAAAAGCAGAGCTATCAGTTTTCAACTCAATTTTCAATTTTATCATGCCATACCTTCTGGGGTGGCATGCGTTTGCAAATTCCATAAAACCGGACGATCAAAGCCGATTGAATAACGCCAATCCAAGATATGGAGGAGACTTTGAATGGAGCAGATAG 837 0.4456 MSQLHSLSSSSSSPLTTPYSFQLCPPHSFYPKKSLSFCPSSTSHGFNFSLTLPSSSRTNPFSIKCRQSEYFQQPSFTKPIRNANGNDSVGALPPRVYVGHSVYKGKAALTVTPRPPEFASLESGAFKVSREGYVLLQFAPAVGMRQYDWNRKQVFSLSVGEMGNIISLGARDSCEFFHDPFKGKSDEGQVRKVLKVEPLPDGSGHFFNLSVQNKIENVDESIYIPITKAELSVFNSIFNFIMPYLLGWHAFANSIKPDDQSRLNNANPRYGGDFEWSR 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g1217 278 Gene3D Transcriptional Coactivator Pc4; Chain A 89 266 IPR009044 GO:0003677|GO:0006355
Mibi10g1217 278 PANTHER SINGLE-STRANDED DNA-BINDING PROTEIN WHY2, MITOCHONDRIAL 62 278 IPR013742 GO:0003697|GO:0006355|GO:0006952
Mibi10g1217 278 SUPERFAMILY ssDNA-binding transcriptional regulator domain 94 278 IPR009044 GO:0003677|GO:0006355
Mibi10g1217 278 FunFam Single-stranded DNA-binding protein WHY2, mitochondrial 87 262 - -
Mibi10g1217 278 Pfam Whirly transcription factor 102 236 IPR013742 GO:0003697|GO:0006355|GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi10g1217 Mibi-ChrMibi10 31909200 31912201 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi10g1217 44 278 Whirly Transcription Factor Family AT1G14410 65.532 8.79e-117 334
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Whirly Mibi10g1217 Whirly 2.9e-61 CL0609