Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g1214 ATGTCGATAAAGAAAGCCTTCTTAGCGGATTTACTGCTTCCTACAGTGTCCGCCTTTCACTTCATCTGCTTCTCATTTCGTGTGTCGTTTTACACTCGGCTTGGCTTAAGTGGGTTTGGTATCCAAAGCTCAGTTTCTGAAGCCCTGATCTCTGCCGTGATGGGAAAGACTCCTGGAAAATGGTTCAAGGCCTTGCTTTCAGGGAAGAAATCAAAGTCTCATTCGTCAAAGAAGAAAGATTCCTTTAAATCTTCAAATACCAAGGATTTGCTGGGAGTGTCCTCTGAAATACATGTGTCTGATCCTATTGTGGATTCATCACTGATATCCCAACTCACTTCTGGTGCTACTGCAACTAAGGAATTACTTTCTGAAAAGGGCTCAGTCAGTGAGTTGTCAAACAACAGGGTTGTTATCTCAGCCAGTGAGGAAGAGACCAGTGCACAGGCTGTTGTTGGTTTTGGTTCACAGGATGATCCTGAGAAAATCAGGCTTAACCAAGCTGCTACAAAAGTTCAGGCTGCTTTAAGGGGCTATCAGGCTCGGCAGGAATTTCAAAAACTCAAAGGTATCATACAGCTGCAAGCTCTTATTCGTGGCAACTTGGTCAGGAGACAAGCAGTTGCTACTTTATACTGTATGAAAGGAATAGTCAAGTTTCAAGCGTTAATTCGTGGTTACAATGTTAGGCGTTCTGATATTGGTCTTGAAGTGCATAAAATTTGCAGGGGTACTATATGTTTAATTGCTGTCGGAGCATCAACATCTACGCAGACAGACAAGCTATCCAAAAGTGTCTTTGTTAACAAGCTTCTGGCTTCATCATCTCCTGTCTCTCCCCTGCGTATCAACTATGATCCTGAACAAGGTAATTCAGTTTCAGACTGGCTTGATCGCTGGACGGGTTCTCACTTGTGGGCACCTCTTTTGGGTCTGCAATCAAAATCAACACTTGACTCAGTGTCAAATGAGAAAACTTGCTACAGTCAAACAGTTGAAAAGAATGACGGCCAAGTTAAAAGAAGTGCCCGTAAAAGTTCTGGTGTAAAAGTTAATGATGGTTCAGCCTCCGATTCAAACAAAAATAAACACCATCCAAAAAAGGTTTTAGCTCACCCATTGCATTCAGGCCAAGCAAATACACAAAAGGAAGTTGAGAAAAGTAATTTAAGAAAATCACTCAAGCAGAATGCTTCTGATAGATCTGAGATTGTTAATGGGAAAGGAAAAGGCATACCAAGAAAAGTATCCGGTCATACTGTCACTGATGTCTCAGATAATGGACCCAATGTTTCTGCAGAAAAAATTAAAGATTCAGTTGTGTCAAAATCCAAACAGTCTTCTGATCATGAACAAAGCCTCGTACAAGAAGCAGAAGACGAACATGATTCTCCCATAGCTAACTTGCCATCTGGACTGAAGAATGGTAAAGACGATGGTGTTCAAGAAGTCAGTGAGGACTTGAACTGCATGGACAGTGTCAGCCCTAAGAATTGCCAGAGAAGAGCTTCACTGCCTGCTAAGTTTGACAGTCAAGACGATGGCGTGCAAAAAACTCCAAGACTGCCCAGCTATATGGCCCCTACCGCATCTGCAAAAGCTAGGCTAAAAGGACAAGGCTCCCCTAGGTTTGTTAATGAGTTGCTTGATAAAAATGGTCCAACCAGGCGACATTCTCTTTCATCTTCAGTCAATGGCAAGCTAGGTTCATTTTCTCCACGAGCAGAAAGGCTTGGAACTTTGAGCAGTAAGGGAGTAATTAGAACTGATAGATCTCTGTCTTCTTCAAGGGATGGGAGTGAGAAGTTGATCCAACCTCAGTGGAGAAGGTGA 1833 0.4266 MSIKKAFLADLLLPTVSAFHFICFSFRVSFYTRLGLSGFGIQSSVSEALISAVMGKTPGKWFKALLSGKKSKSHSSKKKDSFKSSNTKDLLGVSSEIHVSDPIVDSSLISQLTSGATATKELLSEKGSVSELSNNRVVISASEEETSAQAVVGFGSQDDPEKIRLNQAATKVQAALRGYQARQEFQKLKGIIQLQALIRGNLVRRQAVATLYCMKGIVKFQALIRGYNVRRSDIGLEVHKICRGTICLIAVGASTSTQTDKLSKSVFVNKLLASSSPVSPLRINYDPEQGNSVSDWLDRWTGSHLWAPLLGLQSKSTLDSVSNEKTCYSQTVEKNDGQVKRSARKSSGVKVNDGSASDSNKNKHHPKKVLAHPLHSGQANTQKEVEKSNLRKSLKQNASDRSEIVNGKGKGIPRKVSGHTVTDVSDNGPNVSAEKIKDSVVSKSKQSSDHEQSLVQEAEDEHDSPIANLPSGLKNGKDDGVQEVSEDLNCMDSVSPKNCQRRASLPAKFDSQDDGVQKTPRLPSYMAPTASAKARLKGQGSPRFVNELLDKNGPTRRHSLSSSVNGKLGSFSPRAERLGTLSSKGVIRTDRSLSSSRDGSEKLIQPQWRR 610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g1214 610 MobiDBLite consensus disorder prediction 438 464 - -
Mibi10g1214 610 Pfam IQ calmodulin-binding motif 215 231 IPR000048 GO:0005515
Mibi10g1214 610 Pfam IQ calmodulin-binding motif 189 206 IPR000048 GO:0005515
Mibi10g1214 610 Pfam IQ calmodulin-binding motif 167 186 IPR000048 GO:0005515
Mibi10g1214 610 ProSiteProfiles IQ motif profile. 187 216 IPR000048 GO:0005515
Mibi10g1214 610 Pfam Protein of unknown function (DUF4005) 511 586 IPR025064 -
Mibi10g1214 610 MobiDBLite consensus disorder prediction 555 569 - -
Mibi10g1214 610 MobiDBLite consensus disorder prediction 332 610 - -
Mibi10g1214 610 ProSiteProfiles IQ motif profile. 165 193 IPR000048 GO:0005515
Mibi10g1214 610 Gene3D - 163 241 - -
Mibi10g1214 610 SMART iq_5 187 208 IPR000048 GO:0005515
Mibi10g1214 610 SMART iq_5 164 186 IPR000048 GO:0005515
Mibi10g1214 610 MobiDBLite consensus disorder prediction 585 602 - -
Mibi10g1214 610 PANTHER IQ-DOMAIN 5-RELATED 54 562 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi10g1214 Mibi-ChrMibi10 31872612 31877861 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi10g1214 54 610 IQD Protein Family AT1G14380 35.197 2.00e-84 273