Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g1211 ATGGGAGTTTGTTTTAGCACAAATTCCCTGAATCCCAATCCCAACCAACCTCACAAAAATATAGTTCATTCTCCTAATGGAAGACATGCCCACTTGGGAAGACCATGGATTGTCAAGGAACAGAGGAATTTGTTCGTTGTTTCAGACAATCACAGAGGAAGGAGGAAGAGAGATGAAAAGAAGAAATGTATAGCTGATCCAAGAAATTTGCATGCTCTGAAAGTAGACAAAGGAATAAGATATCAAATTCTTAAGCTCAAGGAGTTCTCCTATAAAGACATGGAAGATGCCACACAAAGGTTTAGAACTAAGAACTTGATTGGCCGGGGAGGTTTTGCTGATGTTTATAAGGGATATATATCACACTACACCATGAATGCTGCAAAAAGACCAAATGAAGGATTCCCCATTGCTGTAAAGAGAATAAGAAGGCTTGGATCAGGAGGACACGAAGAATGGCTGAATGAAATATTTTATTTGAGCAAAATTAGCCATCCGAACGTAGTGAATCTCATAGGGTATTGCCGTGAGCGTCAGCATAGAATGCTTGTGATTGAGTACATGATTGAAGGAAGCTTGGAGGACCATCTCTTGAAAGAAGACAGAGGAAAGCTAAATTGGAATAGAAGACTAAATATAGCTCTTGGGGCTGCAAGGAGTTTAGACTATCTCCACAGATATGAAACCCCAATTATTCATCGAGATATTAAAACTTCCAATATCCTGCTAGATGATAACTTCAATGCAAAGCTCTCGGACTTTGGACTAGCTAGAGATGGACCTGAAGATGACCACTCCCATGTCTCCTCAAGAATCCTTGGCACTAGAGGCTATTTTGCTCCTGAGTACATAGCCACAGGGCATTTAACTGTAAAAGCTGATGTATATAGTTTTGGAGTGGTTCTGCTAGAGATATTATCAGGTTCTGGTGCAGTTAGGAAACATTCAGATGGGGTGGAAGGGAATCTTGCCCAGTGGGCTGAGCCATTTCTAAGTAACAAGTTTGAACTTAATCGAGTTATAGACAAGCGACTCGGACAAAATTTTCCCATGGAAGGAGCCTACGAGTTGGCTCAACTAATCCTAAATTGCCTCTGCTTAGATCCTAAAAACCGTCCAACAATGGCTGAAGTTGTGGCTGCCTTGGAACAGATAGAACTTAACTTAGGATTTCATTATAAGAGAATGTATAGTAGAAGAACCAGACCTCATTCTTATTGTCGCTCTTAA 1230 0.4057 MGVCFSTNSLNPNPNQPHKNIVHSPNGRHAHLGRPWIVKEQRNLFVVSDNHRGRRKRDEKKKCIADPRNLHALKVDKGIRYQILKLKEFSYKDMEDATQRFRTKNLIGRGGFADVYKGYISHYTMNAAKRPNEGFPIAVKRIRRLGSGGHEEWLNEIFYLSKISHPNVVNLIGYCRERQHRMLVIEYMIEGSLEDHLLKEDRGKLNWNRRLNIALGAARSLDYLHRYETPIIHRDIKTSNILLDDNFNAKLSDFGLARDGPEDDHSHVSSRILGTRGYFAPEYIATGHLTVKADVYSFGVVLLEILSGSGAVRKHSDGVEGNLAQWAEPFLSNKFELNRVIDKRLGQNFPMEGAYELAQLILNCLCLDPKNRPTMAEVVAALEQIELNLGFHYKRMYSRRTRPHSYCRS 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g1211 409 ProSitePatterns Serine/Threonine protein kinases active-site signature. 231 243 IPR008271 GO:0004672|GO:0006468
Mibi10g1211 409 ProSitePatterns Protein kinases ATP-binding region signature. 107 140 IPR017441 GO:0005524
Mibi10g1211 409 Gene3D Transferase(Phosphotransferase) domain 1 188 396 - -
Mibi10g1211 409 SMART serkin_6 101 385 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi10g1211 409 ProSiteProfiles Protein kinase domain profile. 101 387 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi10g1211 409 FunFam PTI1-like tyrosine-protein kinase 3 188 393 - -
Mibi10g1211 409 Pfam Protein tyrosine and serine/threonine kinase 103 382 IPR001245 GO:0004672|GO:0006468
Mibi10g1211 409 Gene3D Phosphorylase Kinase; domain 1 72 187 - -
Mibi10g1211 409 MobiDBLite consensus disorder prediction 1 27 - -
Mibi10g1211 409 MobiDBLite consensus disorder prediction 1 22 - -
Mibi10g1211 409 SUPERFAMILY Protein kinase-like (PK-like) 82 394 IPR011009 -
Mibi10g1211 409 PANTHER OS01G0588500 PROTEIN-RELATED 82 386 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi10g1211 Mibi-ChrMibi10 31755589 31758471 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi10g1211 84 382 Glycoside Hydrolase AT3G07070 45.364 1.68e-81 254
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Mibi10g1211 PK_Tyr_Ser-Thr 2.7e-51 CL0016