Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mibi10g1210 | ATGGGTAACTGCCTTGATTCTTCTGCCAAAGTTGATGCAGCTCAAAGTTCTCGAACGTCTGGATCGGGAATATCAAAAACTAGCCCTTCATCTGCACCTTCCACCTTATCACTTCCATCATTTAGTGAAAAAAGCAATGCCTCAAGTCTTCCCACACCAAGGTCTGAGGGTGAAATTTTGTCCTCTCCGAATCTAAAGGCATTCACATTCAATGACCTAAAGAATGCCACCAGAAATTTTCGTCCTGATAGTCTTCTTGGTGAAGGCGGATTTGGCTATGTTTATAAGGGGTGGATTGATGAACATACTTTCCTGGCTGCAAGACCTGGATCAGGGATGGTTGTTGCTGTGAAAAGGCTAAAACCTGAAGGCAGCTTTCAAGGTCACAAGGAGTGGTTGACTGAAGTTAACTACCTTGGGCAACTCCACCATGTAAATCTGGTTAAATTAATTGGGTACTGCTTGGAGGGGGAGAACCGGTTATTGGTCTATGAGTTTATGCCCAAAGGGAGCTTAGAAAATCATCTGTTTAGAAGAGGCCCTCAGCCACTCTCTTGGTCAGTGAGGATGAAAGTCGCGATTGGGGCTGCCAGAGGGCTCTCTTTTCTCCACAACGCCAAATCACAAGTCATATATCGTGATTTTAAAGCTTCCAACATCCTGCTAGATGCTGACTTCAATGCTAAACTCTCTGATTTCGGCTTGGCTAAGGCGGGTCCTACTGGTGATAAAACTCATGTGTCTACTCAAGTTATGGGAACTCATGGATATGCAGCTCCTGAGTATGTTGCTACAGGTCGGTTGACAGCGAAGAGTGATGTCTATAGCTTTGGGGTTGTGTTGCTTGAACTTCTATCTGGACGACGTGCAGTTGATAGATCAAAAGCTGGTGTGGAGCTAAATCTGGTAGATTGGGCAAAACCATATTTGGGTGACAAAAGGAAACTTTTTAGGATTATGGACACCAAGTTGGAGGGCCAGTACCCTCAAAAAGGAGCCTACACGGCTGCAACTCTTGCTCTACAATGCTTGAATGCGGAAGCCAAAGCAAGGCCTCCGATGACTGAGGTCTTAGCAACACTTGAACAGATTGAAGCCCCCAAGAGCGCAGGCCGACACTCCCACTCAGAACCACAGAGAGCCCATGTCCATGTAAGGAGTTCTGCTGCACGAACCAGGTCCCCACTACATTTGACTCCAACCGCATCCCCATTGCCGGCTCACCGGCATACAGCTCGTGTACACTGA | 1248 | 0.4688 | MGNCLDSSAKVDAAQSSRTSGSGISKTSPSSAPSTLSLPSFSEKSNASSLPTPRSEGEILSSPNLKAFTFNDLKNATRNFRPDSLLGEGGFGYVYKGWIDEHTFLAARPGSGMVVAVKRLKPEGSFQGHKEWLTEVNYLGQLHHVNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWSVRMKVAIGAARGLSFLHNAKSQVIYRDFKASNILLDADFNAKLSDFGLAKAGPTGDKTHVSTQVMGTHGYAAPEYVATGRLTAKSDVYSFGVVLLELLSGRRAVDRSKAGVELNLVDWAKPYLGDKRKLFRIMDTKLEGQYPQKGAYTAATLALQCLNAEAKARPPMTEVLATLEQIEAPKSAGRHSHSEPQRAHVHVRSSAARTRSPLHLTPTASPLPAHRHTARVH | 415 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mibi10g1210 | 415 | Gene3D | Transferase(Phosphotransferase) domain 1 | 167 | 389 | - | - | |
| Mibi10g1210 | 415 | MobiDBLite | consensus disorder prediction | 367 | 415 | - | - | |
| Mibi10g1210 | 415 | MobiDBLite | consensus disorder prediction | 1 | 58 | - | - | |
| Mibi10g1210 | 415 | Pfam | Protein tyrosine and serine/threonine kinase | 84 | 360 | IPR001245 | GO:0004672|GO:0006468 | |
| Mibi10g1210 | 415 | ProSiteProfiles | Protein kinase domain profile. | 80 | 364 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Mibi10g1210 | 415 | PANTHER | OS01G0588500 PROTEIN-RELATED | 42 | 365 | - | - | |
| Mibi10g1210 | 415 | MobiDBLite | consensus disorder prediction | 9 | 58 | - | - | |
| Mibi10g1210 | 415 | ProSitePatterns | Protein kinases ATP-binding region signature. | 86 | 118 | IPR017441 | GO:0005524 | |
| Mibi10g1210 | 415 | SUPERFAMILY | Protein kinase-like (PK-like) | 51 | 361 | IPR011009 | - | |
| Mibi10g1210 | 415 | FunFam | Serine/threonine-protein kinase BIK1 | 47 | 166 | - | - | |
| Mibi10g1210 | 415 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 210 | 222 | IPR008271 | GO:0004672|GO:0006468 | |
| Mibi10g1210 | 415 | MobiDBLite | consensus disorder prediction | 368 | 384 | - | - | |
| Mibi10g1210 | 415 | Gene3D | Phosphorylase Kinase; domain 1 | 56 | 166 | - | - | |
| Mibi10g1210 | 415 | CDD | STKc_IRAK | 86 | 364 | - | - | |
| Mibi10g1210 | 415 | FunFam | Probable serine/threonine-protein kinase PBL8 | 167 | 381 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Mibi10g1210 | Mibi-ChrMibi10 | 31751866 | 31754634 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Mibi10g1210 | 12 | 361 | Glycoside Hydrolase | AT3G07070 | 47.592 | 3.85e-109 | 325 |
Transcription factors information