Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g1208 ATGAGGAAGGTAAAGCAGCAACAGCAGCAGCTGGGTAAGGAAGAAGAATCACAGAAGAAGGAGCGTCATATTGTGACGTGGACACAAGAGGAAGATGATATATTGAGGAAGCAGATAAGCATCAATGGAACTGAAAAGTATACTGATGATTCCCTTTTGTCATTTTGGGCCATTATTGCATCTAACTTCAAAGACAAAACGACAAGACAGTGCAGAAGAAGATGGTACACTTACTTGAACTCTGATTTCAAGAAAGGAGGATGGTCACCAGAGGAAGACTTGCTCTTATGCGAGGCTCAGAAGATATTTGGCAATAGATGGACAGAAATAGCAAAGGTGGTTTCAGGCAGAACGGATAACGCTGTGAAAAACCGTTTCTCCACTCTGTGCAAGAAGAGAGCCAAGTTTGAAGCCTTGGCAAAAGAGAATAGCACTTCGTTCACTAATTCAAATAACAAAAGGACTATTTTCCAACAGGGTGATAACAAAGAGTCAATATCAGAGGCTGCACCACCTGCTAAGAAGATGAGGAGAGCCCATATTCCTGATGCAGCAGAAAAGATGAACTATGGAGACAGGTCCCATAAGCATTATGAAGCAACGTTAAAACAGCAGCCAAGAGAGCCATTTTCAATTTTGGCTCAGAACTTGGCAGATCAGCATGAAGCCTCCAATGACAACAATAGCAGAAATGCCCATAACTGCAAGACTGAAGAAACATTTCTTAAAGAGGATGATCCAAAGTTAAGTGTGTTGATGCAACAAGCAGAGTTACTAAGTTCACTAGCTCTAAAAGTTAATACAGATGATGTGGACCAGAGTCTAGAAGATGCATGGAAGGTACTTCAAGAGTTTCTGAACCAAACCAAAGAATCAGATATTCTCAAATATAAGATTACGGATTTACAGCTTGTAGATCTTAAATATATGATGGAGGAATTTAAGAGTAGTAATCTGGGGAGCCAGCAATGTTGGAGGCAACCAGAACTATATGAGGACTCTCCGAGCAGTTCTGAATACAGCACAGGATCAACTCTTCTACCCCATTCAGCAAGTGATAATCTGGAACGTTCTCTGCTTCAGGATATTGGAACTGATCTAAAGCCTATCAAACTTGGAGATCAAAAAGGAGTTAGTGAATGTGGGAAAGAAGATCTTTCTTCTGCAACAGTAGGTCAAGTGGCAAATATTTTTCCATCTTGTGAGGAACAGATAAGCAATGATGGCATTGCTTCTACCTCATCAAGCACAGAGTTCAATTCCCCTCATCAAGTTACCCCTATGTTCAGATCATTGGCTGCAGGAATTCCCAGCCCACAGTTTTCAGAAAGTGAAAGGAACTTCCTAATGAAAACGCTGGGATTGGAGTCCCCATCCTTGAATCCAAGTGCCAACCCTTCACAACCACCACCCTGCAAAAGAGCCCTACTAAACAGTCTATAA 1443 0.4158 MRKVKQQQQQLGKEEESQKKERHIVTWTQEEDDILRKQISINGTEKYTDDSLLSFWAIIASNFKDKTTRQCRRRWYTYLNSDFKKGGWSPEEDLLLCEAQKIFGNRWTEIAKVVSGRTDNAVKNRFSTLCKKRAKFEALAKENSTSFTNSNNKRTIFQQGDNKESISEAAPPAKKMRRAHIPDAAEKMNYGDRSHKHYEATLKQQPREPFSILAQNLADQHEASNDNNSRNAHNCKTEETFLKEDDPKLSVLMQQAELLSSLALKVNTDDVDQSLEDAWKVLQEFLNQTKESDILKYKITDLQLVDLKYMMEEFKSSNLGSQQCWRQPELYEDSPSSSEYSTGSTLLPHSASDNLERSLLQDIGTDLKPIKLGDQKGVSECGKEDLSSATVGQVANIFPSCEEQISNDGIASTSSSTEFNSPHQVTPMFRSLAAGIPSPQFSESERNFLMKTLGLESPSLNPSANPSQPPPCKRALLNSL 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g1208 480 ProSiteProfiles Myb-like domain profile. 27 79 IPR001005 -
Mibi10g1208 480 MobiDBLite consensus disorder prediction 7 23 - -
Mibi10g1208 480 MobiDBLite consensus disorder prediction 1 23 - -
Mibi10g1208 480 ProSiteProfiles Myb-like domain profile. 80 130 IPR001005 -
Mibi10g1208 480 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 19 79 IPR017930 -
Mibi10g1208 480 CDD SANT 88 129 IPR001005 -
Mibi10g1208 480 PANTHER MYB PROTEIN-RELATED 26 207 - -
Mibi10g1208 480 SUPERFAMILY Homeodomain-like 59 137 IPR009057 -
Mibi10g1208 480 SMART sant 84 132 IPR001005 -
Mibi10g1208 480 SMART sant 23 81 IPR001005 -
Mibi10g1208 480 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 80 134 IPR017930 -
Mibi10g1208 480 Pfam Myb-like DNA-binding domain 85 128 IPR001005 -
Mibi10g1208 480 Pfam Myb-like DNA-binding domain 26 79 IPR001005 -
Mibi10g1208 480 CDD SANT 26 79 IPR001005 -
Mibi10g1208 480 Gene3D - 86 164 - -
Mibi10g1208 480 MobiDBLite consensus disorder prediction 453 480 - -
Mibi10g1208 480 Coils Coil 1 21 - -
Mibi10g1208 480 Gene3D - 14 84 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi10g1208 Mibi-ChrMibi10 31717954 31722877 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi10g1208 74 480 MYB Transcription Factor Family AT1G14350 52.439 1.39e-133 390
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mibi10g1208 Myb_DNA-binding 9.6e-09 CL0123