Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g1198 ATGGAAGAAGCTGATCATTCCAATGGCATCCGCAGACCCAATTTCCCACTTCAGCTCTTGGAGAAGAAAATCGCCGAACACCGACACGACGATGACGGCGGCGGCGCCGGCGCCGGAGCCGGAGCCGGCGGGCCCAATAGTAACAACCTCCAACTGTCCGACCAATCGAAGAAGCCGGCGCCGAAGCGGGCCTCGACGAAGGACCGGCACACGAAGGTCGAGGGCCGGGGCCGCCGGATCCGGATGCCGGCGGCCTGCGCCGCCAGGGTCTTCCAGCTCACCCGGGAGCTCGGCCACAAGTCCGACGGCGAGACCATCGAGTGGCTCCTCCAGCAGGCCGAGCCCGCCGTGATCGCCGCCACCGGCACCGGCACCATCCCCGCCAACTTCACCTCCCTCAACATCTCCCTCCGGAGCTCCGGCAGCACGGTGTCGGCGCCGTCACACTACTTCAGGGGTAATGATAATAGTTACAGCAGTTACTTCAGCCCAAGCTTGTTCTCTTCCTCCTTGCAGTTGAGAAACAACACAATAATTGAAGATTCCAGAAGAATGATTTTTCCGGCAGCCGGCGCCGGAGCCGGAGGGTTTTCGTCTTCATCCTCGCCGGAGAATAACAACAACAATAACAATAACAATAATAATTTCAGCCCTGGTAGCAATGTGAATGCCATGTTACAATTATCAAAGCAGGAGCTCCGGGAAGAAACCGCCGGCGGCAGCACCGGGATTGAGCCGACGGAGGTGGCGGAAGCCGACGGGAATTTGGGGAAAAAAAGGCGGTCGTCGCCGTCGCCGGAACAGATGGGGAGTTATTTGTTACAGTCGAGCGCCGGGTCGATTCCGGCGAGCCATTCGTCGGTGCCGGCGACGTTTTGGATGGTAAGTAATAGCCACGCCGCCGCCGGAAACAACCAATCCGCCGGCACCGGAAACGGCGATCCGATATGGGCGATTCCATCGGTAGGGAATTATGGTAACATGTATAGAGGAGGGATGTCTGGTGGTGGTGGGAGTGGGATTCATTTCATGAATTTTCAATCTCCAATGGCTTTAATGGGAGGAGGAGTACATCATCATCATCATCATAGTAATAATCATCAATTAGGAGGTAATGTTATGAATGAAAGCAATTTAGGCATGCTTGCTGCTCTTAATGCTTACCGGCAGATTCCGGCGAGCGCCGTTTCGGAGTCTCCGGCGATCACCGGACACGGTGGAGGTGACCAATGA 1233 0.5661 MEEADHSNGIRRPNFPLQLLEKKIAEHRHDDDGGGAGAGAGAGGPNSNNLQLSDQSKKPAPKRASTKDRHTKVEGRGRRIRMPAACAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFTSLNISLRSSGSTVSAPSHYFRGNDNSYSSYFSPSLFSSSLQLRNNTIIEDSRRMIFPAAGAGAGGFSSSSSPENNNNNNNNNNNFSPGSNVNAMLQLSKQELREETAGGSTGIEPTEVAEADGNLGKKRRSSPSPEQMGSYLLQSSAGSIPASHSSVPATFWMVSNSHAAAGNNQSAGTGNGDPIWAIPSVGNYGNMYRGGMSGGGGSGIHFMNFQSPMALMGGGVHHHHHHSNNHQLGGNVMNESNLGMLAALNAYRQIPASAVSESPAITGHGGGDQ 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g1198 410 MobiDBLite consensus disorder prediction 1 77 - -
Mibi10g1198 410 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 51 375 IPR005333 GO:0003700
Mibi10g1198 410 ProSiteProfiles TCP domain profile. 66 120 IPR017887 -
Mibi10g1198 410 MobiDBLite consensus disorder prediction 44 59 - -
Mibi10g1198 410 MobiDBLite consensus disorder prediction 193 271 - -
Mibi10g1198 410 MobiDBLite consensus disorder prediction 195 236 - -
Mibi10g1198 410 Pfam TCP family transcription factor 65 216 IPR017887 -
Mibi10g1198 410 MobiDBLite consensus disorder prediction 60 77 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi10g1198 Mibi-ChrMibi10 31488296 31489528 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi10g1198 56 369 TCP Transcription Factor Family AT3G47620 42.197 1.80e-54 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Mibi10g1198 TCP 3.2e-38 No_clan