Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g1177 ATGGATTTCACCGCCGCCGCGTCATCTCCGGCCGCCGCATCCGCCAAGTCTCTCACTTTCACCAACGGGACCCTAAAGCACCACCACCGTTCGCCGCCGCACACGGCGGCGCCGGTCACCTACAAGGAATGCCTGAAAAACCACGCCGCCGCCATCGGCGGCCACTCGCTCGACGGCTGCGGCGAATTCATGCCCTCCTCCGCCGCCGAACCCGCCGACCCGCGATCCCTCAAATGCGCCGCCTGCGGCTGCCACCGGAATTTCCACCGCCGTGACCCCCATGACCTTCCCTCCAGCCCCACCTTCTTAAGCTGCTTCTTCCCACCCCTCCCTCCGCCGCCACCGCCTCTACCTCCTCGCGGGCTAAGCCCAAGCCCAAGTTCGAGCCCGGGCCCGGGCCCAGGCCCGGGCCCAAGTAGCCCGAGCCCATTTTCGAGCCCGTCGCCGCCGGTGATGTCGCGTTTCCCTCCTACTTCCTATGTGTCTCAGCATCATCATCTGGTGGCGGTCGGAAGCGCGTATTCTGGACGGTCCGATGAGGGGGATCGTGATCGTCGCCGGAGGTTCGGGAATTCTCCGGCGAGGAAGGCGGAGAAGGAGGGCCCGGGAGGGAGGAAGAGGCACAGGACGAAATTCAGCAAGGAGCAGAAGGAGAAGATGTTTGAATTCTCTGAGAGATTGGGTTGGAGAATGCAGAAAGGGGATGATAGGAATGTTCAAGATTTTTGCAATGAGGTTGGTGTCTCTAGGGGTGTGTTCAAGGTTTGGATGCACAATAACAAGAACACTTTCAGGAAGAAATCACAAGTTATTGGGAATAATACCCAAATTGAGATAATGAATAATGAAGGTGATCATCACGCTAACAAGGACGATAATCACAGGAATGAAGAAGAAGAAGAAGGTAGCCGTATTAATCTTCAAATCTCTGTTAATTAA 939 0.5719 MDFTAAASSPAAASAKSLTFTNGTLKHHHRSPPHTAAPVTYKECLKNHAAAIGGHSLDGCGEFMPSSAAEPADPRSLKCAACGCHRNFHRRDPHDLPSSPTFLSCFFPPLPPPPPPLPPRGLSPSPSSSPGPGPGPGPSSPSPFSSPSPPVMSRFPPTSYVSQHHHLVAVGSAYSGRSDEGDRDRRRRFGNSPARKAEKEGPGGRKRHRTKFSKEQKEKMFEFSERLGWRMQKGDDRNVQDFCNEVGVSRGVFKVWMHNNKNTFRKKSQVIGNNTQIEIMNNEGDHHANKDDNHRNEEEEEGSRINLQISVN 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g1177 312 MobiDBLite consensus disorder prediction 113 154 - -
Mibi10g1177 312 TIGRFAM homeo_ZF_HD: homeobox domain, ZF-HD class 205 262 IPR006455 -
Mibi10g1177 312 FunFam Zinc-finger homeodomain protein 2 193 266 - -
Mibi10g1177 312 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 41 92 IPR006456 -
Mibi10g1177 312 TIGRFAM ZF_HD_prot_N: ZF-HD homeobox protein Cys/His-rich dimerization domain 40 92 IPR006456 -
Mibi10g1177 312 MobiDBLite consensus disorder prediction 283 304 - -
Mibi10g1177 312 Pfam ZF-HD protein dimerisation region 39 93 IPR006456 -
Mibi10g1177 312 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 28 263 - -
Mibi10g1177 312 Gene3D - 190 266 - -
Mibi10g1177 312 MobiDBLite consensus disorder prediction 172 216 - -
Mibi10g1177 312 SUPERFAMILY Homeodomain-like 200 266 IPR009057 -
Mibi10g1177 312 MobiDBLite consensus disorder prediction 281 312 - -
Mibi10g1177 312 MobiDBLite consensus disorder prediction 113 158 - -
Mibi10g1177 312 MobiDBLite consensus disorder prediction 177 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi10g1177 Mibi-ChrMibi10 31300529 31301467 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi10g1177 39 264 ZF-HD Transcription Factor Family AT1G69600 44.978 6.40e-55 177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Mibi10g1177 ZF-HD_dimer 3.9e-28 No_clan