Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g1174 ATGCCTGTGGATGTGGCTGGGCCTTCTGGGTTGGCTCCTAAGGTGGACGATGATGATGATGAGAGTTCTGAAGATGATGATAATGAGGATTGTAAGGAGGATGAGCCTCTGATCCAGATGGCTGAGTGTCGCATTTGTCAAGAGGAGGATAGTGTTCAGAATTTGGAGACTCCTTGTGCATGTAGCGGCAGCCTTAAGTTCGCTCACAGAAAGTGCGTTCAACATTGGTGCAATGAGAAAGGAGATATTATCTGTGAGATATGTCATCAGCCTTATCAACCAGGTTATACCGCCCCTCCTCCTCGTCCCCAACCTGAAGAAACTACCATTGACATAGGTGGGGGCTGGACAATCTCTGGCACACCTTTGGACTTGCGTGATCCTCGACTGCTGGCAATTGCTGAGGCAGAACGCCAATTCTTGGAAGCTGAATATGATGAGTATGCTGCTTCTAATGCCAGTGGAGCAGCTTTTTGTCGCTCTGCTGCTCTAATTCTAATGGCTCTCTTACTCTTGCGGCATGCACTTTCAGTTACAGACTCTGATGCTGATGATGATCCATCTACTTTTTTCTCTCTTTTCTTGCTTAGAGCAGCTGGATTTCTTTTACCTTGCTACATCATGGCTTGGGCAATCAGTATTTTGCAACGCCGGCGACAAAGACAAGAGGCAGCAGCATTGGCTGCAACCCAAGTTGCTTTTGTATTACAATCTGGACAGCGTAGGGGTCTGCAATTTGCTATAGCACCAGCAGGACCAACACTGAATTCACCGCAGGAGCAAGTGTAA 789 0.4753 MPVDVAGPSGLAPKVDDDDDESSEDDDNEDCKEDEPLIQMAECRICQEEDSVQNLETPCACSGSLKFAHRKCVQHWCNEKGDIICEICHQPYQPGYTAPPPRPQPEETTIDIGGGWTISGTPLDLRDPRLLAIAEAERQFLEAEYDEYAASNASGAAFCRSAALILMALLLLRHALSVTDSDADDDPSTFFSLFLLRAAGFLLPCYIMAWAISILQRRRQRQEAAALAATQVAFVLQSGQRRGLQFAIAPAGPTLNSPQEQV 262
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g1174 262 Pfam Protein of unknown function (DUF3675) 94 212 IPR022143 -
Mibi10g1174 262 Pfam RING-variant domain 43 88 IPR011016 GO:0008270
Mibi10g1174 262 Coils Coil 131 151 - -
Mibi10g1174 262 MobiDBLite consensus disorder prediction 1 33 - -
Mibi10g1174 262 MobiDBLite consensus disorder prediction 17 33 - -
Mibi10g1174 262 FunFam RING/FYVE/PHD zinc finger protein 31 99 - -
Mibi10g1174 262 SMART ringv_2 42 89 IPR011016 GO:0008270
Mibi10g1174 262 PANTHER RING/FYVE/PHD ZINC FINGER DOMAIN-CONTAINING 18 222 IPR033275 -
Mibi10g1174 262 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 22 98 IPR013083 -
Mibi10g1174 262 SUPERFAMILY RING/U-box 41 93 - -
Mibi10g1174 262 CDD RING_CH-C4HC3_MARCH 43 89 - -
Mibi10g1174 262 ProSiteProfiles Zinc finger RING-CH-type profile. 35 95 IPR011016 GO:0008270
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Mibi10g1174 Mibi-ChrMibi10 31263313 31266184 Dispersed/Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi10g1174 42 88 C3H Transcription Factor Family AT2G37950 42.000 2.97e-06 45.1