Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mibi10g1148 | ATGGATCAATCAATGGCTTCTGAATCCCATGTTTCTGAGAATCCATCTCTCTCTGAAGGCTTATTCAGATTCAGAGACCTCTCTGTTTTCTTACCCTTCATCTTAGGCTTCTCCACCGATTCTTCTTCCAGTCAAGACCCAAATCAGGAAACCACAAGTTCAGTAAATGGGGAAAGAGAAAGAGTCATCTTGATCAACCCCTTTACGCAAAACATGGTGGTGATTGGTGGTAATAATTCGAGCCTTGAAACTCTGTTCCAAGAAATTGGTTTGAAAAATGGGCAGCCTCCAGCGTCGAAGGAATCTATAGATGCGATGCCAATGGTGGAGATTGGAGAAGAAGAAGGTGGTGGCGAGTGTGTGATATGTTTGGAGGAATGGGAGGTTGGTGGGGTGGCGAAAGAGATGCCATGTAAACACAAGTTTCATCAGAATTGTATAGAGAAGTGGTTGGGAATTCATGGGTCTTGCCCTGTTTGTAGATATCAGATGCCTGTGGGTGAGAGAGAAGTGGGCAAGAGAGATGAAGATGAAGAACAAGAAGGAGGAGAGAGGAGGAGGGTTGGCAGGGAAATTTTGGTGAGTTTCTCTTTTAGGAGTGAGAATTCAAACCAAGGTCCTTCTGATAATTCCAGTGATCCTTCAGTTCAAGAGGTGATTCTGAGGTAG | 669 | 0.4439 | MDQSMASESHVSENPSLSEGLFRFRDLSVFLPFILGFSTDSSSSQDPNQETTSSVNGERERVILINPFTQNMVVIGGNNSSLETLFQEIGLKNGQPPASKESIDAMPMVEIGEEEGGGECVICLEEWEVGGVAKEMPCKHKFHQNCIEKWLGIHGSCPVCRYQMPVGEREVGKRDEDEEQEGGERRRVGREILVSFSFRSENSNQGPSDNSSDPSVQEVILR | 222 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mibi10g1148 | 222 | FunFam | E3 ubiquitin-protein ligase RNF181 | 86 | 167 | - | - | |
Mibi10g1148 | 222 | MobiDBLite | consensus disorder prediction | 168 | 222 | - | - | |
Mibi10g1148 | 222 | Pfam | Ring finger domain | 119 | 161 | IPR001841 | - | |
Mibi10g1148 | 222 | SUPERFAMILY | RING/U-box | 114 | 165 | - | - | |
Mibi10g1148 | 222 | PANTHER | E3 UBIQUITIN-PROTEIN LIGASE PRAJA | 46 | 165 | - | - | |
Mibi10g1148 | 222 | SMART | ring_2 | 120 | 160 | IPR001841 | - | |
Mibi10g1148 | 222 | MobiDBLite | consensus disorder prediction | 196 | 222 | - | - | |
Mibi10g1148 | 222 | MobiDBLite | consensus disorder prediction | 168 | 192 | - | - | |
Mibi10g1148 | 222 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 86 | 167 | IPR013083 | - | |
Mibi10g1148 | 222 | ProSiteProfiles | Zinc finger RING-type profile. | 120 | 161 | IPR001841 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Mibi10g1148 | Mibi-ChrMibi10 | 30724416 | 30725084 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Mibi10g1148 | 5 | 198 | C3H Transcription Factor Family | AT1G26800 | 51.500 | 7.66e-59 | 182 |