Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g1141 ATGGGTGCATACTTGCATGTGAATTTGGCAGCTTGTTATTATGTTTACCACATCAGTAAAAAAATGGCTCTCATTGGGTTACTCTTGATGGGTTTTCTCTCATTGCTCTCCTCTGTTCATTGCTATGGAGGTGGATGGGTTAATGCTCATGCCACCTTCTATGGAGGTGGTGATGCTTCAGGCACAATGGGTGGGGCTTGTGGGTATGGGAATCTGTATAGCCAAGGCTATGGAACTAACACAGCTGCTTTGAGCACTGCTCTGTTCAACAATGGGCTGAGTTGTGGGTCATGCTATGAGATTAGGTGTGTGAATGATAGAAGATGGTGCTTACCAGGTTCCATAGTGGTCACAGCTACCAATTTCTGCCCACCAAACAATGCCTTGCCTAATAATGCAGGAGGATGGTGTAACCCTCCTCTCCACCATTTTGATCTCGCTCAGCCTGTTTTTCTCCACATTGCTCAATACAGAGCTGGCATAGTTCCTGTGGCTTACAGAAGGGTATCCTGCAGGAGAAGGGGAGGCATAAGGTTCACAATCAATGGCCACTCCTATTTCAACCTGGTCCTCATCACAAACGTTGGAGGTGCCGGTGATGTGCACAGTGTGGCCATCAAAGGGTCAAGAACAAGGTGGATGCAAATGTCAAGAAACTGGGGCCAAAACTGGCAAAGCAACAACTATCTCAATGGCCAAGCCCTCTCCTTCAAGGTCACCACCAGTGATGGCCGCTCTGTAGTGTCCTTCAATGTTGCCCCACCCAACTGGTCTTTTGGCCAAACCTTCACTGGCGCCCAATTCCGCTAG 810 0.484 MGAYLHVNLAACYYVYHISKKMALIGLLLMGFLSLLSSVHCYGGGWVNAHATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIRCVNDRRWCLPGSIVVTATNFCPPNNALPNNAGGWCNPPLHHFDLAQPVFLHIAQYRAGIVPVAYRRVSCRRRGGIRFTINGHSYFNLVLITNVGGAGDVHSVAIKGSRTRWMQMSRNWGQNWQSNNYLNGQALSFKVTTSDGRSVVSFNVAPPNWSFGQTFTGAQFR 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g1141 269 Gene3D - 34 172 IPR036908 -
Mibi10g1141 269 SUPERFAMILY Barwin-like endoglucanases 45 194 IPR036908 -
Mibi10g1141 269 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 64 176 IPR007112 -
Mibi10g1141 269 PANTHER EXPANSIN-A15 32 268 IPR002963 GO:0009664
Mibi10g1141 269 FunFam Expansin 36 172 - -
Mibi10g1141 269 Pfam Lytic transglycolase 81 166 IPR009009 -
Mibi10g1141 269 FunFam Expansin 176 268 - -
Mibi10g1141 269 Pfam Expansin C-terminal domain 177 254 IPR007117 -
Mibi10g1141 269 SUPERFAMILY PHL pollen allergen 173 265 IPR036749 -
Mibi10g1141 269 PRINTS Expansin/Lol pI family signature 213 227 IPR007118 GO:0005576
Mibi10g1141 269 PRINTS Expansin/Lol pI family signature 159 175 IPR007118 GO:0005576
Mibi10g1141 269 PRINTS Expansin/Lol pI family signature 45 60 IPR007118 GO:0005576
Mibi10g1141 269 PRINTS Expansin/Lol pI family signature 251 265 IPR007118 GO:0005576
Mibi10g1141 269 PRINTS Expansin/Lol pI family signature 63 81 IPR007118 GO:0005576
Mibi10g1141 269 PRINTS Expansin/Lol pI family signature 85 103 IPR007118 GO:0005576
Mibi10g1141 269 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 186 265 IPR007117 -
Mibi10g1141 269 PRINTS Expansin signature 103 114 IPR002963 GO:0009664
Mibi10g1141 269 PRINTS Expansin signature 115 125 IPR002963 GO:0009664
Mibi10g1141 269 PRINTS Expansin signature 151 164 IPR002963 GO:0009664
Mibi10g1141 269 PRINTS Expansin signature 187 208 IPR002963 GO:0009664
Mibi10g1141 269 PRINTS Expansin signature 251 267 IPR002963 GO:0009664
Mibi10g1141 269 PRINTS Expansin signature 134 151 IPR002963 GO:0009664
Mibi10g1141 269 PRINTS Expansin signature 222 243 IPR002963 GO:0009664
Mibi10g1141 269 PRINTS Expansin signature 76 90 IPR002963 GO:0009664
Mibi10g1141 269 PRINTS Expansin signature 175 187 IPR002963 GO:0009664
Mibi10g1141 269 SMART dpbb_1 81 166 IPR007112 -
Mibi10g1141 269 Gene3D - 176 268 IPR036749 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi10g1141 Mibi-ChrMibi10 30653073 30655067 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi10g1141 21 269 Expansin Gene Family AT2G03090 82.731 3.94e-157 435