Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g1133 ATGGTGCAAGATCTCCCTCCTGGCTTCAGGTTTCACCCCACTGATGAAGAACTCATCGTCTATTACCTTCGTAACCAGTACACATCAAACCCATGCCCTTCTTCTATCATCCCAGAAGTTGATATCTATAAATCCGATCCTTGGGACTTGCCAGAGAAAGCAGAGTTTGGAGAGAAGGATAGGTATTTCTTTAGCCCGCGAGACAGGAAGTACCCTAATGGAGTTAGACCTAACAGGGCCACTGTGTCTGGGTATTGGAAGGCAACTGGGACAGATAAGGCCATATATAGCGGCTCTAAGCATATTGGGTTGAAGAAAGCTCTGGTTTTCTACAAAGGGAAGCCACCAAAAGGTGTCAAAACTAGTTGGATCATGCATGAGTATCGACTTGTTGAATCTAGAACCAGAGCATCACAAGCCAACAGACATGTTGGGTCCATGAGATTGGATGACTGGGTTTTATGCAGGATTTATAAGAAGAATAGGGGGAAGACAGTAATGGAGGAGAAACATGAATTTCCCATTAGTACTGCGGATAATGGAAATGAAACGATAGTTACAGGAAATAACTATCATCAGAATGAGCCAGAAATGATGAAGCTTCTTCTTTCAACAAGGACTTTTAATAACTATCTTGGTTCATCAGTTTCTTCACAGATATTCACAGAAGGAGGACGCTATAATAATGATTCAACCTTTGATCTTCAAAATCAAAATCAAAATCAGGCCTCTTCTTTTGTGAAACCTAGCAAATTTGCAGACCATAATTATTATTATGCTCAAGATTATTTTCAAGAGATGAAACCGATCAATAGCAGCATCAACAGCAACCAGTCAATGTTTGTGAACCAAGTGTTTGATATGTGA 867 0.4048 MVQDLPPGFRFHPTDEELIVYYLRNQYTSNPCPSSIIPEVDIYKSDPWDLPEKAEFGEKDRYFFSPRDRKYPNGVRPNRATVSGYWKATGTDKAIYSGSKHIGLKKALVFYKGKPPKGVKTSWIMHEYRLVESRTRASQANRHVGSMRLDDWVLCRIYKKNRGKTVMEEKHEFPISTADNGNETIVTGNNYHQNEPEMMKLLLSTRTFNNYLGSSVSSQIFTEGGRYNNDSTFDLQNQNQNQASSFVKPSKFADHNYYYAQDYFQEMKPINSSINSNQSMFVNQVFDM 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g1133 288 Pfam No apical meristem (NAM) protein 6 130 IPR003441 GO:0003677|GO:0006355
Mibi10g1133 288 SUPERFAMILY NAC domain 3 161 IPR036093 GO:0003677|GO:0006355
Mibi10g1133 288 Gene3D NAC domain 14 164 IPR036093 GO:0003677|GO:0006355
Mibi10g1133 288 FunFam NAC transcription factor 14 164 - -
Mibi10g1133 288 ProSiteProfiles NAC domain profile. 5 160 IPR003441 GO:0003677|GO:0006355
Mibi10g1133 288 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 4 236 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi10g1133 Mibi-ChrMibi10 30557935 30559524 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi10g1133 5 246 NAC Transcription Factor Family AT1G69490 57.025 2.69e-95 280
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mibi10g1133 NAM 6.6e-38 No_clan