Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g1113 ATGAGCTCTGATAACTCCACCGGCGGCGGATCTTCCGGCGGATCTTCGTCGGAGAAGAAGAAGGGGAAGGCAAAAGCGAGTGGAACTTCGATGATACTATGGCATTCGCATCAAAACGATGTGGCCGCTGTACGGAAGCTTCTAGAAGAAGATCCGTCGCTTGTGATGGCAAGGGATTACGATAATCGAACTCCTCTTCATGTTGCTTCTCTCCATGGTTGGATTGATGTTGCTAAATGCTTGATTGAATTTGGTGCTGATGTTAATTCTCAGGATCGTTGGAGAAACACTCCTCTAGCTGATGCAGAAGGGGCTAAAAAGTATGGCATGGTGGAGCTTTTGAAATCATATGGAGGCTTGTCTTATGGCCAAAGTGGAAGCCACACTGAACAGAAGTCCGTTGCACCCCCATTGTCCAACAAGTGTGATTGGGAAGTCGACCCTACTGAGCTGGATTTCTCACATTCAGTTCGTATTGGAAAGGGATCTTTTGGTGAGATTGTGATAGCCCACTGGCGTGGGACACCAGTTGCTGTCAAACGCATTCTTCCTTCTCTTTCAGATGATAAATTAGTGGTCCAGGACTTCAGGCATGAGGTAAATTTGTTAGTGAAGCTTCGACACCCAAATGTAGTCCAGTTTCTGGGAGCCGTTACTGAGAAGAAACCTCTTATGTTAATTACTGAATATCTTAGAGGGGGCGATCTTCATCAGCATCTTAAGGAAAAAGGTTCAATTAGTCCGTCGACAGCTGTCAGCTTTGCCTTAGATATTGCCAGAGGGATGGCCTATCTTCACAACGAACCAAATGTTATAATTCATCGAGACCTTAAGCCAAGGAATGTCCTATTAGTCAATTCTAGTGCAGAGCATTTAAAAGTTGGAGATTTTGGACTGAGCAAGCTTATCAAGGTCCAGAGTTCTCATGACGTTTACAAGATGACGGGTGAAACTGGAAGCTACCGGTATATGGCTCCTGAAGTATTCAAACACAAGAAATACGATAAGAAGGTCGATGTCTTCTCCTTTGCAATGATACTATACGAGATGCTCGAAGGGGAACAACCTTTTGCAAATATTGAGCCTTATGATGCAGCCAAACACGTGGCAGAAGGACACAGGCCAACTATGCGGGCAAAGGGTTATATCCCTGAACTGCGAGAGTTAACAGAACACTGCTGGGCAGCTGATTACCATCAAAGACCTTCCTTCTTGGAGATCCTTCGACGACTTGAGAAGATCAAAGGACATCATCTACCTTCAGAGCATCACTGGAAATTGTTTCCTAAATAA 1293 0.4486 MSSDNSTGGGSSGGSSSEKKKGKAKASGTSMILWHSHQNDVAAVRKLLEEDPSLVMARDYDNRTPLHVASLHGWIDVAKCLIEFGADVNSQDRWRNTPLADAEGAKKYGMVELLKSYGGLSYGQSGSHTEQKSVAPPLSNKCDWEVDPTELDFSHSVRIGKGSFGEIVIAHWRGTPVAVKRILPSLSDDKLVVQDFRHEVNLLVKLRHPNVVQFLGAVTEKKPLMLITEYLRGGDLHQHLKEKGSISPSTAVSFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSAEHLKVGDFGLSKLIKVQSSHDVYKMTGETGSYRYMAPEVFKHKKYDKKVDVFSFAMILYEMLEGEQPFANIEPYDAAKHVAEGHRPTMRAKGYIPELRELTEHCWAADYHQRPSFLEILRRLEKIKGHHLPSEHHWKLFPK 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g1113 430 ProSiteProfiles Ankyrin repeat region circular profile. 61 93 - -
Mibi10g1113 430 Pfam Protein tyrosine and serine/threonine kinase 158 411 IPR001245 GO:0004672|GO:0006468
Mibi10g1113 430 Gene3D Transferase(Phosphotransferase) domain 1 233 426 - -
Mibi10g1113 430 ProSitePatterns Protein kinases ATP-binding region signature. 159 180 IPR017441 GO:0005524
Mibi10g1113 430 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 87 414 - -
Mibi10g1113 430 CDD STKc_MAP3K-like 159 411 - -
Mibi10g1113 430 PIRSF ILK 1 430 - -
Mibi10g1113 430 SMART ANK_2a 61 90 IPR002110 GO:0005515
Mibi10g1113 430 Gene3D Phosphorylase Kinase; domain 1 145 232 - -
Mibi10g1113 430 ProSiteProfiles Ankyrin repeat profile. 61 93 IPR002110 GO:0005515
Mibi10g1113 430 FunFam serine/threonine-protein kinase STY46-like 146 232 - -
Mibi10g1113 430 SUPERFAMILY Ankyrin repeat 27 118 IPR036770 -
Mibi10g1113 430 ProSitePatterns Serine/Threonine protein kinases active-site signature. 272 284 IPR008271 GO:0004672|GO:0006468
Mibi10g1113 430 MobiDBLite consensus disorder prediction 1 29 - -
Mibi10g1113 430 SUPERFAMILY Protein kinase-like (PK-like) 152 420 IPR011009 -
Mibi10g1113 430 ProSiteProfiles Protein kinase domain profile. 153 426 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi10g1113 430 Pfam Ankyrin repeats (3 copies) 28 92 IPR002110 GO:0005515
Mibi10g1113 430 FunFam Integrin-linked protein kinase family 232 428 - -
Mibi10g1113 430 SMART serkin_6 153 415 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi10g1113 430 MobiDBLite consensus disorder prediction 1 17 - -
Mibi10g1113 430 Gene3D - 5 126 IPR036770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi10g1113 Mibi-ChrMibi10 29848795 29853655 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi10g1113 4 428 MAP Kinase Kinase Kinase AT1G14000 79.294 0.0 699
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-5 Mibi10g1113 PK_Tyr_Ser-Thr 2.2e-64 CL0016