Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g1104 ATGGACACAATTTTCAACGGTGGCTCCTCCTCCTCCGGCGGCGGCTTTGGGTTCAGTAGTCCTGGTCCTATGACTCTGGTTTCCAATTTCTTTAACGACAACGATGACTTCAAGTCCTTCTCTCACCTCCTCACCGGCGTCATGCCGCCATCTCCGTTGGTGGCAGATGGCGGCGGCGCCACCACCGGCTACACTGACGCCCCAAGGCTTTTTCCAGCTTTTCAGGTCAACGAGAATCTACCATCTTCTGTATTGGGTGCTTCCATGGGTAAACAAGTTGAGATGCCACGAAGCTCGGTGCCATCGACGGTGAATGTGAAGGAATGTCCTGATGATGGATTCAATTGGAGGAAGTATGGGCAGAAACAGGTGAAAGGGAGTGAATTTCCTAGGAGTTATTACAAGTGCACGCATCTGAATTGCCCTGTGAAGAAGAAGGTGGAGAAATCTGTGGATGATGACCATGTGGTGGCCATCATTTATAAAGGACAACATAATCATCAACCTCCTCGTCCTACTATAGGGACAACATTGGATCAGTCAATGGCAGCTGGTGATGAACATGAAGGAGGAGGATCAAGTGAGAGTGATGAGGAAGATAATAATGATCACGTTGAGGAGAAAAATAATGATGAGCCTGACCTTAAGAGGAGGAGAAATAATGCAGAAGGTAGTGTGGTGGGGTGTGAGGGAGGGGCATCACATAGAACAGCAATGGAGCCAAGGATAATTGTGCAGACAACAAGTGAAGTAGACCTGCTAGATGATGGCTATAGATGGCGCAAATATGGCCAAAAGGTTGTCAAAGGCAATCCGTTCCCAAGGAGCTACTACAAGTGCACAACCACAGGCTGCAATGTTAGGAAACATGTGGAGAGAGCATCATCAGATCCTAAAGCTGTGATTACAACCTATGAAGGAAAACACAATCATGAAGTGCCAGCAGCTAAAACTAACAGCCACACCATTGCCAACAACTCAGCATCATCACAGCTAAGACCCCACAATTCCACAATACCAGATAGACATAGTTTCAATCAACAGCCTGTGGCACGTCTTAGGTTGAAGGAAGAACGGATAACCTAG 1086 0.4733 MDTIFNGGSSSSGGGFGFSSPGPMTLVSNFFNDNDDFKSFSHLLTGVMPPSPLVADGGGATTGYTDAPRLFPAFQVNENLPSSVLGASMGKQVEMPRSSVPSTVNVKECPDDGFNWRKYGQKQVKGSEFPRSYYKCTHLNCPVKKKVEKSVDDDHVVAIIYKGQHNHQPPRPTIGTTLDQSMAAGDEHEGGGSSESDEEDNNDHVEEKNNDEPDLKRRRNNAEGSVVGCEGGASHRTAMEPRIIVQTTSEVDLLDDGYRWRKYGQKVVKGNPFPRSYYKCTTTGCNVRKHVERASSDPKAVITTYEGKHNHEVPAAKTNSHTIANNSASSQLRPHNSTIPDRHSFNQQPVARLRLKEERIT 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g1104 361 ProSiteProfiles WRKY domain profile. 249 314 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mibi10g1104 361 FunFam WRKY transcription factor 95 171 - -
Mibi10g1104 361 MobiDBLite consensus disorder prediction 206 223 - -
Mibi10g1104 361 SMART WRKY_cls 110 169 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mibi10g1104 361 SMART WRKY_cls 254 313 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mibi10g1104 361 MobiDBLite consensus disorder prediction 327 348 - -
Mibi10g1104 361 Pfam WRKY DNA -binding domain 255 312 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mibi10g1104 361 Pfam WRKY DNA -binding domain 111 168 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mibi10g1104 361 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 193 337 IPR044810 GO:0003700
Mibi10g1104 361 FunFam WRKY transcription factor 33 241 307 - -
Mibi10g1104 361 ProSiteProfiles WRKY domain profile. 111 170 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mibi10g1104 361 MobiDBLite consensus disorder prediction 327 345 - -
Mibi10g1104 361 MobiDBLite consensus disorder prediction 183 234 - -
Mibi10g1104 361 SUPERFAMILY WRKY DNA-binding domain 108 170 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mibi10g1104 361 SUPERFAMILY WRKY DNA-binding domain 246 314 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mibi10g1104 361 Gene3D WRKY domain 95 171 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mibi10g1104 361 Gene3D WRKY domain 239 315 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi10g1104 Mibi-ChrMibi10 29755285 29758110 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi10g1104 14 44 WRKY Transcription Factor Family AT2G03340 77.419 8.61e-08 52.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mibi10g1104 WRKY 8.7e-26 CL0274