Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g1076 ATGGAGGAGAGGAAGTTCATATGCAAGTATTGCAACAAGGAGTACCCATGTGGGAAGTCTCTGGGTGGACACATCAAGACTCATATGATGACCACTGAACATTTTTCATCATCGCTTCAATCCAAGCAAGGTAGAATCAATAGTAATGCCGATGATAGTGTTGTCAAGTTCGATGGTGGAAGGAAGAAAAGGAAGAGAGATTTTGGGTCTGAGGAAGCTGAAGCTTCAGGAGGAAACCCCATTTTTTATGGTCTTCGTGAGAATCCCAAGAAAACAACGAGGTTTGTACATAATAATTCCAACGTTGTTGTGAAACAACAACAACAACAACAACAACAACAACAAGAGAGGTTTTGCAAAGAATGTGGGAAAGGCTTTCTGTCTCTGAAAGCTCTATGCGGCCACATGGCCTGTCATTCTGAGAAAGATAAAGGGATGATGAAGAAGAAGAACAACAAGTTTGAGAACAGTTCTGGGTTTAGCATGAAGCAGAAATTGGTGGTGGGTGATAGCCAATTGGACACTGATGGTGAGACATCATCTGCTCCGAATCATCATCCTAGAAGATCCAGAAGAATGAGGTTCAAGACAGTGAATAGTGATAATAAAAACAATCGACCTTGTTTTGTTTCTTCTTTTGGCAATGGTTCTTCATCTGTGTCTGAGGTTGAGCAGGAACAAGAAGAGATCGCTAGGTGTTTGATGTTGTTATCCAAAGACTCTAGCCATAGGAGGGGTCGTTTTGTTTTGCCCAGTGAGTTTTCAGACAACAATTCTGCTGTGGTTGAGGCAAAATCACCGTCTGTGGACAAGATTATTACTGTAAAAAATTGTAAGAAAAGCTGTGTGTCTAATGGTTTTGAGATGGTGAAGGAGAAGAAGGTGGAGCTGTATAATAATGATAGTAGCAGCATGAAGTTGAAGTCTGCTGAGATTGTCGATTATGATAATTCAGATTCTGGGTATTTCAGAAATGGTCCCAAGAAGTTGGGTTTTTCAATTAATGGGTATCATAGGAATGGGGAATTCAAGACACCAAAAGTGGAAGTCATGTCTGGGTGTGAGTTTGATCAGAGCTATGACGCTGAATTGAGGAGGAAGATGTTACTCAAGAACAGGGGAAACACCAGAGGCACTACTGGACCCAGAAAGCTAATTTTGGAGGATTTGAACTCCAAGACAACAGATGGATTGGCAAGGGAGGATTTCATCAAGTGGACAAAGAGACCAAGATATGATTCTCTTTGCCAAAACAATTCAGTCGGTGTTTCTTGCAAGAGGACACCAAATGGTTGTCACAATGAGCGGCCATTGAAGAAGCCAGAGAGCTTAAACAGTGAAAAAATTATCAAAGGCTCTCAAGATTCAGCATACGAGACTGATGAAAGCATCAAGGTCGTCAATGCAAAGAAGGATGGCAAGTTCAAGAAGAAATTGAAGTCAAAGAAAAGCCTGAACTTTGAGATTTCATTTGCTCTTAGCAATCTTGGTGATTCAGTGTTGAGACTATTGAGATGTGTCAAGTCGGTGATGACTGGGATAGTTGGGTGGGATGCTTTGCTAGTTTGCTTTGTGGAGGGACAAGTGTGA 1590 0.4145 MEERKFICKYCNKEYPCGKSLGGHIKTHMMTTEHFSSSLQSKQGRINSNADDSVVKFDGGRKKRKRDFGSEEAEASGGNPIFYGLRENPKKTTRFVHNNSNVVVKQQQQQQQQQQERFCKECGKGFLSLKALCGHMACHSEKDKGMMKKKNNKFENSSGFSMKQKLVVGDSQLDTDGETSSAPNHHPRRSRRMRFKTVNSDNKNNRPCFVSSFGNGSSSVSEVEQEQEEIARCLMLLSKDSSHRRGRFVLPSEFSDNNSAVVEAKSPSVDKIITVKNCKKSCVSNGFEMVKEKKVELYNNDSSSMKLKSAEIVDYDNSDSGYFRNGPKKLGFSINGYHRNGEFKTPKVEVMSGCEFDQSYDAELRRKMLLKNRGNTRGTTGPRKLILEDLNSKTTDGLAREDFIKWTKRPRYDSLCQNNSVGVSCKRTPNGCHNERPLKKPESLNSEKIIKGSQDSAYETDESIKVVNAKKDGKFKKKLKSKKSLNFEISFALSNLGDSVLRLLRCVKSVMTGIVGWDALLVCFVEGQV 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g1076 529 SMART c2h2final6 117 139 IPR013087 -
Mibi10g1076 529 SMART c2h2final6 6 28 IPR013087 -
Mibi10g1076 529 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 1 486 - -
Mibi10g1076 529 ProSiteProfiles Zinc finger C2H2 type domain profile. 6 33 IPR013087 -
Mibi10g1076 529 MobiDBLite consensus disorder prediction 55 72 - -
Mibi10g1076 529 MobiDBLite consensus disorder prediction 38 84 - -
Mibi10g1076 529 ProSiteProfiles Zinc finger C2H2 type domain profile. 117 144 IPR013087 -
Mibi10g1076 529 ProSitePatterns Zinc finger C2H2 type domain signature. 8 28 IPR013087 -
Mibi10g1076 529 MobiDBLite consensus disorder prediction 171 194 - -
Mibi10g1076 529 Pfam C2H2-type zinc finger 119 141 - -
Mibi10g1076 529 Pfam C2H2-type zinc finger 6 29 - -
Mibi10g1076 529 ProSitePatterns Zinc finger C2H2 type domain signature. 119 139 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi10g1076 Mibi-ChrMibi10 29456329 29459607 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi10g1076 1 340 C2H2 Transcription Factor Family AT1G26610 42.614 4.06e-57 195