Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g1075 ATGGACCTTGATATATTCCCATGGGTACTCGAGTTTCTCCTCAGAAATTCAGTTCCAGATTCACTCCTCAGAAAAATCCTTGATTCTCTACCTCTCTCTCGAATCGATTCACGGCTATGGAAAACACTATCCCTCAGATCTATCCAATCAGAGATGGACACGTCATCATTCACAGAAACCTCATTGCAATCCCTCGAGGTCATCGAAGAAATCGACAGGCTTGATGGCATTGCAACCACACAAGCCATGAAGGAGGCATATTGTGCGGTGGCTGTTGAATGCTGTGTGAGGTACATTGATGCATGCCCAGAGAAAAATACTCGTGGGTTGTTTGATGATTCCATGAATAGAATATGGAAAGGCCGAATTAGGCATATGGTGGAGGCAATGGGGTTAGGGAAGACCAGTAATTTATTTTCTGCTGAGTTGGTTAGGTGGAAGGATGTGTTAGAGTCTGCACGTTGGGATGTAGAGGTGTGTGGGAGGTTGATGAACATGAATACTAGAGAAAATGCAGTGGAAAAGGTTAGGGTTTATCTGAAAGAAAGTTGGGATTTTTTGGGACCGTCTTTTCTTGAGTTAGTAGATGTGTTGTCTTCAGGCAAGGGTTTGGAGAATTCAAAGGGGGATACCAAGGTGGGTGACAAGGGTGTTTCTGAATCTGTCTTGGTTTTTGATAAGGTGAATATGTGTAGAGGAAGGTCACATTGTTTGAGTAATATGACTGAGGAGGGTTTAGTTGTGTCTGATGGAAGTGCATTGTGTAATGCTGCAATATGCAAGGAGAAGGCGCCAGTGGCAGGTGGGAATCAAGATAGGGAGAAGTTGGGAAAGAGAGTCTTGCCTCAAAGGATGAATGAAGCTATTCAAAAGGGCAAGCTGCCACTTGAACATAATCGTGCTGCTCCCTCTACACGTAGAGGAGTTAAAATTGTTGATGCTGAGGAAGTAGGGCCAGTGAAAGTGCGTGGGAAAGATCACAGTCAATCTAATATTCAAGTTGAAAAACTCCGGAGGTCTCTCATGTCAAGTTCTTTGGAGTTGCGTGCATTGGTGAAGGATCCTCTTCCTGATGCATTACATAAATCTGACATTGTTAGATCTGAATTAGCAATGAAGGGTGTGAATCATGAGCCTCCTTCTGCAAACCATAGTACATTTGTAAATGTACCAGAACAAAATACATGCAGGAGCATGGTGCTTTATCAACCTTTCAATGATACTTTAAAGAAACAGTCTTCTGCTAGTTGCAGTAATGTTCAGCGTCCTAGCTTGATGGAACGAAATAGTACTGCCCATACTTATGAGTGGGATGATCCATTTAATGACTGGCCTGGGGGAAGCCCTAAGAAAAGGAGGAAAAAAGGAAGATGGAGTTCTGAAGAAGAGGATGCTTTAAGAGATGGTGTAAAGAAGTTTGGCAAAGGAAACTGGAAAGCAATCCTTAGATTTCACAGTGAGATATTTGCAAAGGCAGGAAGAACAGAAGTTGATTTGAAGGATAAATGGAGAAATTTGACACGTATAGCTTTGGAGCTGAGCCAGATCCTCATATCAAATTCACAGGGAATCTACTTAGGTACTCCCTTCTTCATGAGAGAGCAACTGTGCTGTCTATGCTTCAATTCTCGACAAGTTGCAGAGGAGACTTCTTCTTGGCAAGTATTAACCATCACTGCCGCTGTTGTATGGCACCGTGGCGCATATGCACCAACTTCTGCTCACCTTCCTCCGAAGGATTCTGTTTGTTTGCCTTGCATGGAGGAGATGATGAGTAATGGGGTTAACGGTCAGGATCAGAGAATATTGTTCAACAGATTAGAGCTGGCTCAAAACTACCATAAATGGTGCGTTTCATATTGGATGCAGAGGGGTGGCACCCGCCAATTTCCGCTTGTAGGTTATGGCAGGAGAGGGGTGAAAACTGAGATTTTTGGGAATGGTGTGTCCAATCGGATATGTACAGTTATAGCCAAATGTGTTTTCATTCCCTCCTCACGCCCTCTAAGAAGAACGAAAATAACCGAGAAAACTATTTCAGAACCTGCCCTCGTGAGATTCAGTATTCTTCTCTGCTATTGTTCTGAAATTGAGGCACCTGAGATCTGGAGCCTCAACTGA 2121 0.4342 MDLDIFPWVLEFLLRNSVPDSLLRKILDSLPLSRIDSRLWKTLSLRSIQSEMDTSSFTETSLQSLEVIEEIDRLDGIATTQAMKEAYCAVAVECCVRYIDACPEKNTRGLFDDSMNRIWKGRIRHMVEAMGLGKTSNLFSAELVRWKDVLESARWDVEVCGRLMNMNTRENAVEKVRVYLKESWDFLGPSFLELVDVLSSGKGLENSKGDTKVGDKGVSESVLVFDKVNMCRGRSHCLSNMTEEGLVVSDGSALCNAAICKEKAPVAGGNQDREKLGKRVLPQRMNEAIQKGKLPLEHNRAAPSTRRGVKIVDAEEVGPVKVRGKDHSQSNIQVEKLRRSLMSSSLELRALVKDPLPDALHKSDIVRSELAMKGVNHEPPSANHSTFVNVPEQNTCRSMVLYQPFNDTLKKQSSASCSNVQRPSLMERNSTAHTYEWDDPFNDWPGGSPKKRRKKGRWSSEEEDALRDGVKKFGKGNWKAILRFHSEIFAKAGRTEVDLKDKWRNLTRIALELSQILISNSQGIYLGTPFFMREQLCCLCFNSRQVAEETSSWQVLTITAAVVWHRGAYAPTSAHLPPKDSVCLPCMEEMMSNGVNGQDQRILFNRLELAQNYHKWCVSYWMQRGGTRQFPLVGYGRRGVKTEIFGNGVSNRICTVIAKCVFIPSSRPLRRTKITEKTISEPALVRFSILLCYCSEIEAPEIWSLN 706
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g1075 706 CDD SANT_TRF 457 508 - -
Mibi10g1075 706 Gene3D - 448 512 - -
Mibi10g1075 706 PANTHER MYB TRANSCRIPTION FACTOR 4 508 - -
Mibi10g1075 706 Pfam Myb-like DNA-binding domain 455 506 IPR001005 -
Mibi10g1075 706 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 450 511 IPR017930 -
Mibi10g1075 706 MobiDBLite consensus disorder prediction 445 461 - -
Mibi10g1075 706 SMART sant 454 509 IPR001005 -
Mibi10g1075 706 ProSiteProfiles Myb-like domain profile. 450 507 IPR001005 -
Mibi10g1075 706 SUPERFAMILY Homeodomain-like 452 509 IPR009057 -
Mibi10g1075 706 MobiDBLite consensus disorder prediction 437 461 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi10g1075 Mibi-ChrMibi10 29437570 29444969 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi10g1075 458 506 Single Myb Histone (SMH) Gene Family AT1G15720 59.184 3.12e-08 54.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Mibi10g1075 Myb_DNA-binding 2.7e-10 CL0123