Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g1067 ATGGCGTCCCAAATGGCGATCATTGTACGGACGCGTTCTCTGATCAAATCTCTCCACTCCAACGTCGCCAACACCTCCATTAAGACAATCACCACCTTCACTTCTCTCTCTCAGGAGCCTCAACTCGCCGAATCACCAGCATCCCCAACTCCACTTCCTCCAAATCCAGCCTCCGGCAGCCCTCTCTACAATGAGAATTGGCGAAATCCAATTCCACCATCCGCAGCTCAGTCAGTAATCCCATTAGGGTTTCTCAATCTTGTACCTGGTCATCGCATTCAAACCATGGCTCAGACTTTTGATGCTAAGAGCTTGATGGATCAGTTTGCTGATTGGATGGCATCTCAGGAATGGGCTGCTATTAAGGAATTGTTTGAGTCTTGGGTTAAGTCTTTGGACAAGAATGGGAAGCCGAATAAGCCGGATGTGAGTTTGTATAATCATTATTTGAGGGCCAATTTGATGATTGGTTGTTCTGCTGGGGAGTTGCTTGATTTTTTAGCTGGAATGGAGGATTTTGGTATCACTCCTAATACTGCTTCTTTCAATTTGGTGCTTAAGGCAATGCACCATGCCAAAGAGACTGAAGCTGCCCAGAAGTTGCTGGAACGGATGCTGCTGACTGGAAATGAATCTCGCCCCGATAATGAATCATATGATTTGGTCATTGGAATGCTGTTTTTGACTGGCCAAATTGATGCTGCATTGAAATATATAGATTTGGCTTTGAAATCAAGTTATATGTTGTCAATGAAAGTGTTCACAAGTTGTGTAAATAGTTGTATCAAAAAGGGTAGGCTAGATACTTTGGCAGCAATAATTGAAAAGTGCAAGACAATGGATCAGAACAAAGCTCTGTGCCCTCCGTGGAATGTGTGCTACTTAATAGCTGAAACTGCAATGCATCAGGATAACAGCAAGCTAGCTTATTATGCCCTCGAATTTATGGCTATGTGGATTGCAAGGGGTGAGCAGGCAAGACCGCCCGCATCACTTTCTGTAGATGAAGGTTTGATTGTGTCAGCTTTAGCCACAGCAGGTAGTACTTACAGTTCTAATCTGCTAGATGCAGCATGGACTATTTTACGTCGCTCATTGCGTCAAAAAAAGGCTCCTAACCCTGAATCTTATCTCGGAAAGATAAGTGCCCTTGCATCAATGGGGAACTTACAAAGGGCTTTTAGTACACTACATGACTTTGAGGTCGCTTATGGAGATTCCAGTCAAGAAGCAGAAGAAATGTTCTCTCCCTTTACTTCTTTGCATCCATTGGTTGTGGCATGCTCCAAGAAGGGATTTGAAACTTTGGATTCTGTTTATTTTCAACTGGAAAGTTTAAGCAGAGCGGAGACTCCTTATAAATCTGTTGCTGCTTTAAACTGCATCATTCTAGGCTGTGCAAACATATGGGACCTTGATCGCGCATACCAAACTTTTGAAGCAATCGGATCCTCTTTTGGATTAACACCTGATATTCATTCATATAATGCGCTGATGCATGCATTTGGGAAGCTCAAAAAGACACATGAAGCAACTAAAGTGTTTGAGCACCTAGTGAGCTTGGGTGTAAAGCCTAATGCAATGTCATATTCTCTGCTCGTGGATGCCCACCTCATGAACAGAAATGTTAAAGATGCCGTAACTGTAATAGATGATATGGTGGCTGCTGGATTTGAACCTTCAAAAGAGATGCTAAAAAAGGTTAGAAGGCGATGTATGCGAGAAATGGACTATGACAGTGATGATAGAGTTCAATCCCTCGCCAAATCTCTGAACATTCGAATGGGTTCAGAAGCTCGTCGGAGCATGCTATTTAATCTTGATTACAGCATGGATTATGCTTAA 1845 0.4293 MASQMAIIVRTRSLIKSLHSNVANTSIKTITTFTSLSQEPQLAESPASPTPLPPNPASGSPLYNENWRNPIPPSAAQSVIPLGFLNLVPGHRIQTMAQTFDAKSLMDQFADWMASQEWAAIKELFESWVKSLDKNGKPNKPDVSLYNHYLRANLMIGCSAGELLDFLAGMEDFGITPNTASFNLVLKAMHHAKETEAAQKLLERMLLTGNESRPDNESYDLVIGMLFLTGQIDAALKYIDLALKSSYMLSMKVFTSCVNSCIKKGRLDTLAAIIEKCKTMDQNKALCPPWNVCYLIAETAMHQDNSKLAYYALEFMAMWIARGEQARPPASLSVDEGLIVSALATAGSTYSSNLLDAAWTILRRSLRQKKAPNPESYLGKISALASMGNLQRAFSTLHDFEVAYGDSSQEAEEMFSPFTSLHPLVVACSKKGFETLDSVYFQLESLSRAETPYKSVAALNCIILGCANIWDLDRAYQTFEAIGSSFGLTPDIHSYNALMHAFGKLKKTHEATKVFEHLVSLGVKPNAMSYSLLVDAHLMNRNVKDAVTVIDDMVAAGFEPSKEMLKKVRRRCMREMDYDSDDRVQSLAKSLNIRMGSEARRSMLFNLDYSMDYA 614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g1067 614 Gene3D Tetratricopeptide repeat domain 112 308 IPR011990 GO:0005515
Mibi10g1067 614 SUPERFAMILY TPR-like 345 556 IPR011990 GO:0005515
Mibi10g1067 614 Gene3D Tetratricopeptide repeat domain 433 590 IPR011990 GO:0005515
Mibi10g1067 614 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 526 560 IPR002885 -
Mibi10g1067 614 MobiDBLite consensus disorder prediction 38 66 - -
Mibi10g1067 614 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 491 525 IPR002885 -
Mibi10g1067 614 PANTHER OS07G0599000 PROTEIN 1 613 IPR044605 -
Mibi10g1067 614 TIGRFAM PPR: pentatricopeptide repeat domain 529 561 IPR002885 -
Mibi10g1067 614 TIGRFAM PPR: pentatricopeptide repeat domain 493 527 IPR002885 -
Mibi10g1067 614 Pfam PPR repeat family 490 536 IPR002885 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi10g1067 488 580 Glycosyltransferase AT1G05670 26.882 2.25e-07 52.0
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi10g1067 10 29368516 29371763 Mibi10g1067 10 29368516 29371763 ECH