Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g1042 ATGGATACTTCCTTTTTCTCTTCTCTCATCTTCCTCTTTCTCCATCTTTTACTCCTGCCTCTCCAAATTACTTTTGCCAACAATGCCAGTTATCTCCCGTTTGAAAACATTGCCCTCAACTGTGGGACGAAATCATCAGAACAAGTATCATATAATGAGAGGAACTGGACTGGTGATGCGGGTTCAGAGTATGTCTCCTCCAATGCAGAAGCCAAGTCCCTGATAGCCAAAGCCTCCATGATTAATGCATCTGTTCCTGATGTTCCATATATGACTGCTCGAGTATTTCATTCTCAATTTTCCTACAGATTCAATGTCACTCCAGGTCCCAAATTTGTCCGCCTTCACTTCTACCCAACTTCTTACTTGGGTCTGGATGTCTCCAAAGCTTTTATGTCAGTCACTGCTGGTAATTTCACTCTTATGCATAACTTCAGTGTTTTACTCAACACTGATTACATCAACAAAGCCTATCTGATGAAAGAGTTTATCATCCATGTGAGTGGAAGAACTTTGGAACTGACTTTCACTCCATCATCCAATGCTTCAGATGTCTATGCATTCGTCAATGGAATTGAAGTTGTTTCCATGCCCTCCAATCTCTATATTCAGGGTGATAATGCCCATATTCCTTTAGTTGGTCATTATCCTACGCTATATTACATTTATAATGATTCTGCCCTGGAAACCATGTATAGAATCAATGCAGGAGGGGATGAGATTCCAGCCAAATATGATACGGGAATGTTTCGCACTTGGACCAGAGATGATGATTACTTGTATTCACCTCTAGCAGCCGTTGAACCCAATGATATGGCTTCGCCAATTCTGTACCCAGAAACTGCTCCAGCATATCTTGCACCAGAACTTGTCTATAGAACAGCCAGAGCAATGACACCCTTTATAGATGAACGTCTTAATTTAAACTATAATCTGTCATGGTTCTTCCCGATCGATTCCGGTTTCAAATATCTCATTAGGCTGCACTTTTGTAATATTTACCGAGACATAACTTTGGTGAATCAGATAGCTTTTATTATATATTTAAATAATGAAACAGCTACGGATGAATTCGATGTGATTGGGATGAGTGGTGGCATTGGAATTCCTGTGTACCTAGACTTTGTAGTGACGGTTCCTGAAACTAGTGAGGGAAAGCAAGATCTTTGGGTGGATCTTTATCCAGATGTGCAGAGTAAACCTCAGCAGTATACAGCTTTCTTGAATGGTGTAGAGATTTTCAAACTTAGCAGTTGGGATGAAAATCTTGCGGGGGTCAACCCTATTAAGTCTGAGTCAGTGGTGCCGGCGCCTCATGTTGCAGTATCAAAAAAGCCAAAGAAAATCATATTCATCATCATTGGATGTGCACTAAGTGTTGTGGCACTAGGAGGATGGATTCTCTTTTTCCTGATTGTTTATGTGTTGAAATTAGTTGAGCCAAGGAAACTTTCATGGCGAAATCTCCTGATCCTTATCCCTAAAAACGTTAGAAAAGCTCACAAGTTCTCTTTTAAACATCATTTCTCCATGGATGAGATCAGACTGGCGACAAATAATTTTGATGAGGCTCTAGTCATTGGCATTGGTGGGTTTGGCAAAGTTTACAAGGCAAGTTTTAATCATGGGTCTACCTTTGTAGCAATCAAGCGGAGCAATCCAATGTCAGAACAAGGTGCTTTAGAATTTGAGACAGAGATCCATGTGCTCTCCCAGCTGCGCCACCACAACCTTGTTTCTCTTTTGGGTCATTGCCAAGAAGATGGAGAGATGATTCTGGCTTATGAATATATGTCCAATGGTACTCTGTTTGACCATCTTCATTTGAGATCGAGGGAAGATCCACCTTTGTCATGGATTCAACGTCTTGAGATATGCATTGGTGTTGCAAAGGGTTTGCACTACCTCCACACCGGCACGGAGCACAGGTTCATCCACCGAGACATCAAGACAAGCAATATACTCCTAGACCATAATTGGGTGGCCAAAGTTTCAGACTTTGGCTTGTCAAAGGCAAGTAATCCAATCTTAGTGAGCACCAACATCAAGGGCAGTGTTGGATACTTAGATCCAGAATACTTTCGGCATCACAAGTTGACACAGAAATCTGATGTGTACTCATTTGGGGTGGTTTTATTGGAGGTGATAAGTGCAAGGCCTGCAGTGAGTCCAAATGAAGATGATGAACATGGTAACTTGGCAGATTGGGCTCTATATTGCTGTGAGAATGGTATTACAACTCAATTGGTGGACCCTGACCTCGAAGGAAAGATAGCAACAGGATCTTTTGAGACTTATATTGGAGTTGCGAAGAAATGCTTGGCAGAGAAAGGGGTGGAGCGCCCCACCATGAGTGATGTGTTGCAGAGCCTTGTCCTGGCATTGTATCTTCAGAGAAATGCTAATAATATAGCACCAACCAGAGATGGTAATCGAATAGAAAACCCCGACTCAGATAGAAACTCAGATTTGACACCAGGGATTGAGTTCTCTGATATCATGATACCCATTGGACGATGA 2520 0.4187 MDTSFFSSLIFLFLHLLLLPLQITFANNASYLPFENIALNCGTKSSEQVSYNERNWTGDAGSEYVSSNAEAKSLIAKASMINASVPDVPYMTARVFHSQFSYRFNVTPGPKFVRLHFYPTSYLGLDVSKAFMSVTAGNFTLMHNFSVLLNTDYINKAYLMKEFIIHVSGRTLELTFTPSSNASDVYAFVNGIEVVSMPSNLYIQGDNAHIPLVGHYPTLYYIYNDSALETMYRINAGGDEIPAKYDTGMFRTWTRDDDYLYSPLAAVEPNDMASPILYPETAPAYLAPELVYRTARAMTPFIDERLNLNYNLSWFFPIDSGFKYLIRLHFCNIYRDITLVNQIAFIIYLNNETATDEFDVIGMSGGIGIPVYLDFVVTVPETSEGKQDLWVDLYPDVQSKPQQYTAFLNGVEIFKLSSWDENLAGVNPIKSESVVPAPHVAVSKKPKKIIFIIIGCALSVVALGGWILFFLIVYVLKLVEPRKLSWRNLLILIPKNVRKAHKFSFKHHFSMDEIRLATNNFDEALVIGIGGFGKVYKASFNHGSTFVAIKRSNPMSEQGALEFETEIHVLSQLRHHNLVSLLGHCQEDGEMILAYEYMSNGTLFDHLHLRSREDPPLSWIQRLEICIGVAKGLHYLHTGTEHRFIHRDIKTSNILLDHNWVAKVSDFGLSKASNPILVSTNIKGSVGYLDPEYFRHHKLTQKSDVYSFGVVLLEVISARPAVSPNEDDEHGNLADWALYCCENGITTQLVDPDLEGKIATGSFETYIGVAKKCLAEKGVERPTMSDVLQSLVLALYLQRNANNIAPTRDGNRIENPDSDRNSDLTPGIEFSDIMIPIGR 839
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g1042 839 Gene3D Phosphorylase Kinase; domain 1 506 597 - -
Mibi10g1042 839 SUPERFAMILY Protein kinase-like (PK-like) 505 798 IPR011009 -
Mibi10g1042 839 FunFam Lectin-domain containing receptor kinase A4.3 598 806 - -
Mibi10g1042 839 Gene3D - 226 417 - -
Mibi10g1042 839 Gene3D - 36 198 - -
Mibi10g1042 839 Pfam Protein tyrosine and serine/threonine kinase 526 790 IPR001245 GO:0004672|GO:0006468
Mibi10g1042 839 CDD STKc_IRAK 527 791 - -
Mibi10g1042 839 ProSitePatterns Serine/Threonine protein kinases active-site signature. 644 656 IPR008271 GO:0004672|GO:0006468
Mibi10g1042 839 FunFam FERONIA receptor-like kinase 226 417 - -
Mibi10g1042 839 ProSitePatterns Protein kinases ATP-binding region signature. 527 550 IPR017441 GO:0005524
Mibi10g1042 839 FunFam FERONIA receptor-like kinase 36 198 - -
Mibi10g1042 839 Pfam Malectin-like domain 39 415 IPR024788 -
Mibi10g1042 839 SMART serkin_6 521 793 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi10g1042 839 ProSiteProfiles Protein kinase domain profile. 521 797 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi10g1042 839 FunFam receptor-like protein kinase FERONIA 493 597 - -
Mibi10g1042 839 Gene3D Transferase(Phosphotransferase) domain 1 598 808 - -
Mibi10g1042 839 PANTHER OS03G0124300 PROTEIN-RELATED 9 464 - -
Mibi10g1042 839 MobiDBLite consensus disorder prediction 806 825 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi10g1042 Mibi-ChrMibi10 28997792 29000311 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi10g1042 24 839 Receptor kinase-like Gene Family AT3G51550 44.444 0.0 703
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Mibi10g1042 Malectin_like 1.1e-34 CL0202