Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g1041 ATGAAGAAAAGCCACACATTAAAGTTATGCAAGTATGTTCTAAACTTTGTGATGCATCTCTCATTCCTTTTAAATACTTTCAAAACCTGTTCTTCAATGGACACCCCTTCAGATAAAATCCTCCTTAACTGTGGTTCTTTGGAAGAATCACAATTCAATGGAGAAAAATGGATAGGTGACACTCGCACCCACTTTTTGCCTCCAGCATATGACAAAACATCTTCTGCACGCTTCATCTCAAATCTGGGCCGTAAAATACCAGAGATCCCATACTCAACCGCACGCGTGATTCATTCTCCATTCACATACTCTTTCCCTTTCTCCCATGTCCTTGTATTCATCCGTTTTTACTTTCTTTCAACTTCTCACCTGGGACTAGGCCCCTCCCAGGCATACTTTTCTGTTAAAGCGGGTCCTTATACCTTGTTAAGTAATTTCAGCCCATCTATTGCTGCTTATGAGTTCAACTCAGTCTTCTTCACTAAGGATTTCTTGGTCAACATCAAGGAAAACATACTTGACATAGTTTTCATCCCAGATTCTCTAGTTTCCAATGCACTTGCCTTCGTAAATGGCATTGAGATCTTCTCAGTGCCTCTCAGTATTTACTTTCCAGGTCTCCACAATCCCCTTCCATTTCTTGGGCATCAAGTACCTTTCTTCATCAATGACGACTACGCACTTGAAATGCTTTACCGGGTTAATGTTGGAAATGATGATGGTGGCACTGATGCTACAAATGTCTTTGGGACATGGGGCAACGATTTAAGCTACATAGCTGGCTTTCAACACGGAATTGTCCTTGATATTAAGTTTCGCCCAGCTACGGTGACTTACAACTCTTCTAAATCCAATGATTATCATTATGCAGCACCACTGGAACTTTATTGGACCGCCAGGACAATGGGTATCAATGAAGATAACACAAGGTACAACTTAACATGGTCATTCCCTGTTGATTCCGGCTTCAAATATCTTATAAGGCTTCATTTCTGTGAGATATCCATGGACATAACCCAGGTCAACCAAAGGGTGTTCAAGGTATATATCAACAACCAAACAGCAGAGGAGAGCATGGACTTAGTTGCTCTGACAGGTGCACCACTGGTCACTTTATACAGAGACTACATGGTTCTGGTTCCTAAGGGAAATGGGAGGAAGCAAGACATGCGCATTGCCCTTCACCCCAACATGAAGTCAAAGCCCAAGTATGCTGATGCAATACTGAATGGCATTGAGATCCTCAAGTTAAGCGACAGTAGCCACAATCTTGCAGCCAGTATTCAACTGAAAATGGAACGAAAAGAGAAGAAAACTCGATACAGCGTTATTGTTGGAAGCACTGTAGGTGTCATCTTGGGATTGCTCATCACATTTTTTATCCTTATTCACAAAACAGGGAAGAGAGTTAAGTGGGGACCTTTTCGAGTAGTCCCATCAAACTCAGCAGGCAAAAGTCCCAAAAATTTCCATTCAACAGTCATCTCAAGTCAATGCTACCAATTCACATTAGCAGAGATCAGAACAGCCACGAACAACTTCAGTCAGGCTCTTGTCATTGGGGAGGGAGGCTTTGGCAAAGTTTACAAAGGGGTGGTCCACGATGGAGCCACCACTGTGGCAATAAAGCGCTGCAATCCTACTTCCCACCAAGGATATAGAGAGTTTCAAAATGAGATCAATCTGTTATCCTCATTCTGTCACTTGAATTTAGTGTCACTGCTGGGCTACTGTCACGATGACAACGAGCTGATACTTGTCTATGAATACATGGCTGAAGGCACTCTACGTGATCACTTGTACAAAACACAGAAACAGCCACTGCGTTGGAATCGAAGAATAGATATTTGCATTGATGCAGCTCGAGGGTTACATTACCTCCATACAGGCACAAAGCATCCAGTTATTCACCGAGATGTCAAGTCAGCCAACATATTGTTGGATCACAATCTGGTAGCTAAAATTGCAGATTTTGGGTTATCTAGAATTGGCCCCACCTCTGCATCCCACAACCATGTTAGCACTAATGTGAAGGGCACATTTGGCTATTTAGACCCAGAATACTACAGGAGAAGAAAGCTAACTGAAAAATCTGACGTTTACTCATTTGGGGTGGTGCTGTTTGAAGTGTTATGTGGAAGGCCAGCAGTGAATCCTAAGGCAGTGGAAGAGGATGGTGAGAAGATTGGCTTGGTTGAATGGGCTTGGCAGTGTCACCTCTCTGGAGAATTCCATAGAATGATGGACCCGCATTTAAAAGGAAGAGTTCCATCAGGTTGTCTCAAGGAATTTGTAGATATTGGCATCAAGTGCTTGGCAGAAAAGAGCACAGATAGGCCAACTATGGGGGAGGTGCTAAGTAATCTGGAGAAGCTTCTGTTGTTGCAGGAGAGTTTAGATGGGCAAGAAACAAATGGAGATGCACAGTTCCGTATGGGGATAAGTGAGAATATCACAAGCAACAGGTTAGTTAATGAACAATACTTGTGTGATGAAATTGTCCCAATGGATTGA 2514 0.4276 MKKSHTLKLCKYVLNFVMHLSFLLNTFKTCSSMDTPSDKILLNCGSLEESQFNGEKWIGDTRTHFLPPAYDKTSSARFISNLGRKIPEIPYSTARVIHSPFTYSFPFSHVLVFIRFYFLSTSHLGLGPSQAYFSVKAGPYTLLSNFSPSIAAYEFNSVFFTKDFLVNIKENILDIVFIPDSLVSNALAFVNGIEIFSVPLSIYFPGLHNPLPFLGHQVPFFINDDYALEMLYRVNVGNDDGGTDATNVFGTWGNDLSYIAGFQHGIVLDIKFRPATVTYNSSKSNDYHYAAPLELYWTARTMGINEDNTRYNLTWSFPVDSGFKYLIRLHFCEISMDITQVNQRVFKVYINNQTAEESMDLVALTGAPLVTLYRDYMVLVPKGNGRKQDMRIALHPNMKSKPKYADAILNGIEILKLSDSSHNLAASIQLKMERKEKKTRYSVIVGSTVGVILGLLITFFILIHKTGKRVKWGPFRVVPSNSAGKSPKNFHSTVISSQCYQFTLAEIRTATNNFSQALVIGEGGFGKVYKGVVHDGATTVAIKRCNPTSHQGYREFQNEINLLSSFCHLNLVSLLGYCHDDNELILVYEYMAEGTLRDHLYKTQKQPLRWNRRIDICIDAARGLHYLHTGTKHPVIHRDVKSANILLDHNLVAKIADFGLSRIGPTSASHNHVSTNVKGTFGYLDPEYYRRRKLTEKSDVYSFGVVLFEVLCGRPAVNPKAVEEDGEKIGLVEWAWQCHLSGEFHRMMDPHLKGRVPSGCLKEFVDIGIKCLAEKSTDRPTMGEVLSNLEKLLLLQESLDGQETNGDAQFRMGISENITSNRLVNEQYLCDEIVPMD 837
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g1041 837 CDD STKc_IRAK 520 785 - -
Mibi10g1041 837 FunFam Receptor-like protein kinase FERONIA 591 810 - -
Mibi10g1041 837 ProSiteProfiles Protein kinase domain profile. 514 793 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi10g1041 837 Gene3D Transferase(Phosphotransferase) domain 1 591 812 - -
Mibi10g1041 837 SMART serkin_6 514 793 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi10g1041 837 Pfam Protein tyrosine and serine/threonine kinase 519 789 IPR001245 GO:0004672|GO:0006468
Mibi10g1041 837 ProSitePatterns Protein kinases ATP-binding region signature. 520 543 IPR017441 GO:0005524
Mibi10g1041 837 FunFam FERONIA receptor-like kinase 226 418 - -
Mibi10g1041 837 ProSitePatterns Serine/Threonine protein kinases active-site signature. 635 647 IPR008271 GO:0004672|GO:0006468
Mibi10g1041 837 FunFam FERONIA receptor-like kinase 39 199 - -
Mibi10g1041 837 Gene3D - 226 418 - -
Mibi10g1041 837 Gene3D - 40 198 - -
Mibi10g1041 837 SUPERFAMILY Protein kinase-like (PK-like) 488 790 IPR011009 -
Mibi10g1041 837 Gene3D Phosphorylase Kinase; domain 1 479 590 - -
Mibi10g1041 837 Pfam Malectin-like domain 42 416 IPR024788 -
Mibi10g1041 837 PANTHER OS07G0166700 PROTEIN 498 796 IPR045272 GO:0004714|GO:0006468
Mibi10g1041 837 FunFam receptor-like protein kinase FERONIA 479 590 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi10g1041 Mibi-ChrMibi10 28994565 28997078 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi10g1041 35 807 Receptor kinase-like Gene Family AT3G51550 45.153 0.0 679
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Mibi10g1041 Malectin_like 2.3e-26 CL0202