Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g1040 ATGAATACTTCTTTTGCTCTTTTCATCTTTCTGTTTCTCCATCTTTTACTCTTGCCTCTACACATTGCTTTTGCTGCAAATTATCTTCCCTCAGAGAACATTGCCCTCAACTGTGGCACTGACTCATCAGAACAAGTGTCTTACAATGAGAGGAACTGGACTGGTGATGCAGGTTCAGAGTATGTATCCTCTAATAATGCAGAATCCAAATCCCTGATGGCCAAAGCCTCTATAATTAATGCATCTGTTCCTGATGTTCCATACATGACTGCTCGAGTATTTCACTCTCAATTTGCCTACAAATTCAATGTGACTCCAGGTCCAAAATTTGTCCGCCTTCACTTCTACCCAACTTCTTATTTGGGTCTGGATGTCTCCAAAGCTTTTGTATCGGTCACTGCTGGTAATTTCACTCTTCTGCATAACTTGAGTGTTTCGACCACTACTGAGTACAACAACAAAGCATATCTGATGAAAGAGTTCACCATCCATGTGAGTGGAAGAACCTTGGAACTGACTTTCTCTCCATCATCCAATGCTTCGGATGTCTATGCATTTGTCAATGGAATCGAAGTTGTTTCCATGCCTTCCAATCTCTATATTCAAGGTGATAATGCCCGTATTCCTTTTGTTGGTCATTATCCTGCGTTATATAACATCTATAACGATTCAGCCTTGGAGACCATGTATAGAATCAATGTAGGAGGGTATGCAATTCCAGCCAAATATGATACAGGAATGTTTCGCACTTGGACTGGAGATGAAGAAGCTTTATACTCATCGCTAGCAGGTTATGATCCTCATAATATGGTCATGCCAATTATGTATCCAGAAGCTATTCCGCCGTATGTTGCCCCTGAATTGGTCTATCGCTCATCCATTGAAATGCCACCCTTTCCAAATCCCCTTATCAGTTTAAACTACTATCTATCGTGGCTCTTTTCTATGGATACTGGTTTCAATTATCTCTTTAGGCTACACTTTTGTGATATTCATCCAGACTGGATGACTAAGGTGAATCAGGTAGTTTTTAACATAAATTTAGATAATCAAACAGCTATGGTTGGATTCGATGCAATTGCTACGACTGGTGGTCCTGGGATTCCTGTGTACCTAGACTTTGTAGTGATGGTTCCTGAAACCAATGAAGGGAAGCAGGATATTTTGCTGGATCTTTATCCAAATGTGCGGTCTAAACCTCAGTACTATACTTCCTTCTTGAATGGTGTAGAGGTCTTCAAAGTTAGCAATCAGGATGGAAATCTGGCAGCAGTCAACCCTATCAGAAGCATCAAGTCCCAGTCTGTGCCAGTGCGCCATGTTGCAGTATCAAAAAAGCCAAAGAAAATCACATTCATCATCATTGGATGTGGACTAATTCTTGTGGCACTTGGAGTATTGGCACTCCTTTTCCTGATTGTCTACGTGATGAAATTAGTTGAGCCAAGGAAGATTTCAAGGCATAATCTCTTTATCCTTCTTCAAAATAAAGTTAGAAAAGCTCGAAAGTTCTGTTTTAAACATCATTTTTCAATGGATGCGATAAGAGTGGCGACAAATAAATTTGATGAGGCTCTAGTTATTGGCATCGGTGGGTTTGGCAAGGTTTACAAGGCAAGTTTTGATCATGGGTCTACCTTTGTAGCAATCAAGAGGAGCAATCCAATGTCAGACCAAGGTGCTTTAGAATTTGAGACAGAGATTCATGTGCTCTCCCAACTGCGCCACCACAACCTTGTTTCTCTTTTGGGTCATTGCCAAGAAGATGGAGAGATGATCTTGGCTTATGAATATATGTCCAATGGTTCTCTGTTTGACCATCTTCATTTGAGATCAAGGGAAGATCTACCATTGTCGTGGATTCAACGTCTTGAGATATGCATTGGAGTTGCAAGGGGTTTATGTGAGATTATGATAGCCTTAAATATGACATATAACAATCAAATATGCTATCTTCAATCAGAATAA 1968 0.4024 MNTSFALFIFLFLHLLLLPLHIAFAANYLPSENIALNCGTDSSEQVSYNERNWTGDAGSEYVSSNNAESKSLMAKASIINASVPDVPYMTARVFHSQFAYKFNVTPGPKFVRLHFYPTSYLGLDVSKAFVSVTAGNFTLLHNLSVSTTTEYNNKAYLMKEFTIHVSGRTLELTFSPSSNASDVYAFVNGIEVVSMPSNLYIQGDNARIPFVGHYPALYNIYNDSALETMYRINVGGYAIPAKYDTGMFRTWTGDEEALYSSLAGYDPHNMVMPIMYPEAIPPYVAPELVYRSSIEMPPFPNPLISLNYYLSWLFSMDTGFNYLFRLHFCDIHPDWMTKVNQVVFNINLDNQTAMVGFDAIATTGGPGIPVYLDFVVMVPETNEGKQDILLDLYPNVRSKPQYYTSFLNGVEVFKVSNQDGNLAAVNPIRSIKSQSVPVRHVAVSKKPKKITFIIIGCGLILVALGVLALLFLIVYVMKLVEPRKISRHNLFILLQNKVRKARKFCFKHHFSMDAIRVATNKFDEALVIGIGGFGKVYKASFDHGSTFVAIKRSNPMSDQGALEFETEIHVLSQLRHHNLVSLLGHCQEDGEMILAYEYMSNGSLFDHLHLRSREDLPLSWIQRLEICIGVARGLCEIMIALNMTYNNQICYLQSE 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g1040 655 FunFam FERONIA receptor-like kinase 33 196 - -
Mibi10g1040 655 FunFam FERONIA receptor-like kinase 224 416 - -
Mibi10g1040 655 FunFam receptor-like protein kinase FERONIA 489 598 - -
Mibi10g1040 655 SUPERFAMILY Protein kinase-like (PK-like) 512 635 IPR011009 -
Mibi10g1040 655 Gene3D - 33 196 - -
Mibi10g1040 655 Gene3D - 224 417 - -
Mibi10g1040 655 ProSitePatterns Protein kinases ATP-binding region signature. 528 551 IPR017441 GO:0005524
Mibi10g1040 655 Gene3D Transferase(Phosphotransferase) domain 1 505 636 - -
Mibi10g1040 655 PANTHER OS03G0124300 PROTEIN-RELATED 5 474 - -
Mibi10g1040 655 Pfam Protein tyrosine and serine/threonine kinase 527 634 IPR001245 GO:0004672|GO:0006468
Mibi10g1040 655 ProSiteProfiles Protein kinase domain profile. 522 655 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi10g1040 655 Pfam Malectin-like domain 36 415 IPR024788 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi10g1040 Mibi-ChrMibi10 28969998 28971965 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi10g1040 25 634 Receptor kinase-like Gene Family AT3G51550 44.164 2.70e-156 471
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Mibi10g1040 Malectin_like 1.2e-29 CL0202