Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g1037 ATGAACAAGGTGATCCCTCTACTCAACATGAAGAAAAGCCTCACATCAAAGTTATGCAAGTATGTTCTGAGCTTTGTGATGCATCTCTCTTTCCTTTTAAATACTTTCATGATCTGTTCTTCAACGAACATCCCTTCAGATAGAATTCTCCTCAACTGTGGTGCTTTAAAAGAATCACAATTCAATGGAGCCAAATGGACAGGTGACACTCAAACCCATTTTTTGCCTCTAGCATATGACAAAACATCTTCTGCACGCTACATCTCAAACTTGAGCTCTGAAGTACCAGAGGTCCCATACTCAACCGCACGAGTGATTCATTCTCCATTCACATACTCTTTCCCCTTCTCCCATGTCCTTGTATTCATCCGTTTATACTTTCTTTCAACTTCTCACCCGGGACTAAGCCCTTCCCAGGCTTACTTTTCTGTTAAAACGGGTCCTTATACTCTGTTGAGTAATTTCAGCCCATCTATTGCTGCTGACGAGCTCAAAACAGTCTTCTTCACTAAGGATTTCTTAGTCAACGTCATGGAGAAGAGACTTGACATAATTTTCATCCCATCTTCTCTAGTTTCCAATGCACTTGCCTTCGTAAATGGCATTGAGATCTTCTCAGTGCCTCTCAGTATTTACTTTCCAGCTCCCAAAATTCCCCTTCCCTTTCTCGGGCACCAGGGACCTTTCTTCATCAATGATGAATACGCTCTTGAAATGCTTTACCGGGTTAATGTCGGAATTGATAGTTATACTGCTGACGCCATAAATGTCTTTGGAACATGGGGCAACGATTTAAGCTACATAGCTGGCTTTAAACACGGAAGTGTCCTCGATATTAAGCTTCGTCCAGCTACAGTGAGTTACAACTCTTCTAATTCCAATGATAATCATTATGCAGCACCACTAGAACTTTATTGGACTGCCAGGACAATGGGTTTCAATGAAGATAACACCAGGTACAACTTAACGTGGTCATTCCCTGTTGATTCCGGTTTCAAATACCTTGTTAGGCTTCATTTCTGTGAGATAGACATGCACATAACCCAGGTCAACCAAAGGGTGTTCAAAGTATATATCAACAACCAAACAGCAGAGGAGAGCATGGACTTAATTGCTGTGAAAGGTGCGCCACTGTTCCCTTTACACAGAGACTATATGGTTATGGTTCCAAAGGGAAATGGAAGGAAGCAAGACATGCGTATTGCCCTTCACCCCAACATGAAGTCAAAGCCCAAGTATGCTGATGCAATACTGAATGGCATTGAGATCCTCAAGTTAAGCGACAGTAGCCACAATCTTGCAGCCAGTATTCAACTGAAAATGGAACGAAAAGAGAAGAAAACTCGATTCAGCGTTATTGTTGGAAGCACTGTAGGTGTCATCTTGGGATTGCTCATCACATTCTTCATTCTCATTCACAAAGCAGGGAAGAGAGTTAAGTGGGGACCTTTTCGGGTGGTCCCATCAAACTCAGCAGGCAAAATTCCCAAAAATTTGCATTTAACAGTCAGCTCAAGTCAATGCCACCGATTCACATTGGCAAAGATCAGAACAGCCACAAACAACTTCAGCCAGGCTCTTGTCATTGGGGAGGGAGGCTTTGGCAAAGTTTACAAAGGGGTGATCCACGATGGAGTCACCACTGTGGCAATAAAGCGCTGCAATCCTACTTCCCACCAAGGATATAGAGAGTTTCAAAATGAGATCAATTTGTTATCCTCATTCTGTCACACGAATTTAGTGTCACTGCTGGGCTATTGTCAGGAGGACAATGAGATGATACTTGTCTATGAATACATGGCTGAAGGAACTCTTCGTGATCACTTATACAAAACAAAGAAACAGCCACTTCCTTGGAATCAAAGAATAGAGATTTGTATTGATGCAGCTCGAGGGTTACATTACCTCCATACAGGCACAAAGCACCCGGTTATTCACCGAGATGTCAAGTCAGCCAACATATTGTTGGATCACAATCTGGTAGCTAAAATTGCAGATTTTGGGTTATCTAGAATTGGCCCCACCTCTGCATCCTACAACCATGTTAGCACTAATGTGAAGGGCACATTTGGCTATTTAGACCCAGAATACTATAGGAGAAGAAAGCTAACTGAAAAATCTGACGTTTACTCATTTGGGGTGGTGCTGTTTGAAGTGTTATGTGGAAAGCCAGCAGTGAATGCTAAGGCAGTGGAAGAGGATGGTGAGAAGATTGGCTTGGTTGACTGGGCTTGGCAGTGTCACCTCTCTGGAGAATTCCATAGAATGATGGACCCGCATTTAAAAGGAAGAGTTCCATCAGGTTGCCTCAAGCAATTTGTAGATATTGGCATCAAGTGCTTGGCAGAAAAGAGCACAGACAGGCCAACAATGGGGGAGGTGCTAAGTAATCTGGAAAAGCTTCTGTTGTTGCAGGAGAATTTAGATGGACAAGAAACAAATGAAGAGTCACAGTTCCGTATGGGGATAAGTGAGAATACCACAAGCAACAGGTTAGTTGATGAACAATACTTGCGTGATGAAATTGTCCCAATGGATTGA 2541 0.427 MNKVIPLLNMKKSLTSKLCKYVLSFVMHLSFLLNTFMICSSTNIPSDRILLNCGALKESQFNGAKWTGDTQTHFLPLAYDKTSSARYISNLSSEVPEVPYSTARVIHSPFTYSFPFSHVLVFIRLYFLSTSHPGLSPSQAYFSVKTGPYTLLSNFSPSIAADELKTVFFTKDFLVNVMEKRLDIIFIPSSLVSNALAFVNGIEIFSVPLSIYFPAPKIPLPFLGHQGPFFINDEYALEMLYRVNVGIDSYTADAINVFGTWGNDLSYIAGFKHGSVLDIKLRPATVSYNSSNSNDNHYAAPLELYWTARTMGFNEDNTRYNLTWSFPVDSGFKYLVRLHFCEIDMHITQVNQRVFKVYINNQTAEESMDLIAVKGAPLFPLHRDYMVMVPKGNGRKQDMRIALHPNMKSKPKYADAILNGIEILKLSDSSHNLAASIQLKMERKEKKTRFSVIVGSTVGVILGLLITFFILIHKAGKRVKWGPFRVVPSNSAGKIPKNLHLTVSSSQCHRFTLAKIRTATNNFSQALVIGEGGFGKVYKGVIHDGVTTVAIKRCNPTSHQGYREFQNEINLLSSFCHTNLVSLLGYCQEDNEMILVYEYMAEGTLRDHLYKTKKQPLPWNQRIEICIDAARGLHYLHTGTKHPVIHRDVKSANILLDHNLVAKIADFGLSRIGPTSASYNHVSTNVKGTFGYLDPEYYRRRKLTEKSDVYSFGVVLFEVLCGKPAVNAKAVEEDGEKIGLVDWAWQCHLSGEFHRMMDPHLKGRVPSGCLKQFVDIGIKCLAEKSTDRPTMGEVLSNLEKLLLLQENLDGQETNEESQFRMGISENTTSNRLVDEQYLRDEIVPMD 846
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g1037 846 Pfam Protein tyrosine and serine/threonine kinase 528 798 IPR001245 GO:0004672|GO:0006468
Mibi10g1037 846 SUPERFAMILY Protein kinase-like (PK-like) 507 797 IPR011009 -
Mibi10g1037 846 ProSiteProfiles Protein kinase domain profile. 523 802 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi10g1037 846 SMART serkin_6 523 802 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi10g1037 846 FunFam Receptor-like protein kinase FERONIA 600 820 - -
Mibi10g1037 846 Gene3D Phosphorylase Kinase; domain 1 489 599 - -
Mibi10g1037 846 Gene3D Transferase(Phosphotransferase) domain 1 600 826 - -
Mibi10g1037 846 CDD STKc_IRAK 529 794 - -
Mibi10g1037 846 ProSitePatterns Serine/Threonine protein kinases active-site signature. 644 656 IPR008271 GO:0004672|GO:0006468
Mibi10g1037 846 PANTHER OS03G0124300 PROTEIN-RELATED 26 478 - -
Mibi10g1037 846 FunFam FERONIA receptor-like kinase 235 427 - -
Mibi10g1037 846 FunFam receptor-like protein kinase FERONIA 489 599 - -
Mibi10g1037 846 FunFam FERONIA receptor-like kinase 48 208 - -
Mibi10g1037 846 Gene3D - 48 207 - -
Mibi10g1037 846 Gene3D - 235 427 - -
Mibi10g1037 846 Pfam Malectin-like domain 51 425 IPR024788 -
Mibi10g1037 846 ProSitePatterns Protein kinases ATP-binding region signature. 529 552 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi10g1037 Mibi-ChrMibi10 28937855 28940395 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi10g1037 37 809 Receptor kinase-like Gene Family AT3G51550 44.994 0.0 679
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Mibi10g1037 Malectin_like 1.4e-30 CL0202