Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g1024 ATGGAATCTTGGAGTTACGCCTCAGAAGAGAAGAGCTATTTGTTTCCAGATGAAATGGATTTCTCACTGGATGCTTATATGAGAAGTAGAAGAGCAATGGTTGAATGGGACAATAATAATAAATCCTCTTATATCTTTGAGAAAGATGGTTTTGCTTCAGATAAAGAGGTAATTAAAAGCGTTGAGTTTGTGGATTTGGGGTTTCCTGATTTGTTCAGAAGGCCTGTTCATGGTGGTCAGCCACTGGAAGAGTCATCAAACTATGAACATGACAGTGATTCCAGTAAGAGAGTTAATTCCTCTACTCACTTAATTGCTCTTAATTCTACTTTGGGAGAAGTAGAATCTGAGTCAAGGAACTCATGTTCTCTAGTTGAATCTAAAATTCATGATTCTTCACTGATTGATTTAAAGCTAGGGAGATTAGGAGACTGTAAAGATTCAAGTAGTGATAAAAATGACGATGAGGGGTTCACTTTTCAACCTATGTATACTTCCGCCACGCTTACTAAGCGAGCTCGCGCTTCCAGCTTACCTACTCAAACACCTGTTTGTCAAGTTCATGGTTGTAACAAGGATCTTAGCTCCTCAAAAGAGTACCACAAAAGGCACAAAGTTTGTGATGTTCATTCCAAGACAGCCAAAGTTATTGTTAATGGCATTGAGCAAAGGTTTTGTCAGCAGTGCAGCAGGTTCCATTTGCTAGCTGAGTTTGATGATGACAAGCGTAGTTGTCGTAGACGCCTAGCTGGACACAATGAACGTCGAAGGAAGCCTCAGTTTGATTACATCTCTGGTAAACCCCAGAAGATACTGCAGTCATGTCAAGGTGCCAAATATTTTGGGGCTTCATTACAGAAGAGATCCCAGTTTGTGTTTCACGATGTGTTTCAAAGCGGCGTTTTTTATTCGGGAAAGTATGAACAAAGCAGTCAGATTGGACACATCAAGTTTGAAGATGAATCGATTTATGGTTTTCAATTAGAAGAACCCGTGATAACAAACGGTCAAGATTTATCCAGGGCCTCCAACTCCAGAAGTTGTGCTCTCTCTCTTCTGTCAGCTCAGTCAAATGATCTAACACGCAACTCGGTTGGTTCCCTTATTTCTCAAGGCATCTGCACACAGCAAGGTGATGACCGAGTTTCTGAAACAGCTTTTGGGATAAGCTCTCTGGATAAAGTTGTCCCAAGTCAGTCCTTTTCATGTGAGACAAACTCCATGGAAGTTACCAAGAACAGACCCATAATGCCTTCTGATCTTGGTCACGCTCTTCAACTTGAAGTCCATGGAGATGATAATACTGATAAACATTGTCCTCCTGATGTTGAACATGGCTCCACCGTCGATCTGTTCCAATTGTCATCAAATCTTCAAAGGGTGGAGCAGCAAAGAAATTCTCTTCAAGTGAAGCACGAAAACGATGACAGTTGCTTTTTTCCAACCATGTGA 1452 0.4112 MESWSYASEEKSYLFPDEMDFSLDAYMRSRRAMVEWDNNNKSSYIFEKDGFASDKEVIKSVEFVDLGFPDLFRRPVHGGQPLEESSNYEHDSDSSKRVNSSTHLIALNSTLGEVESESRNSCSLVESKIHDSSLIDLKLGRLGDCKDSSSDKNDDEGFTFQPMYTSATLTKRARASSLPTQTPVCQVHGCNKDLSSSKEYHKRHKVCDVHSKTAKVIVNGIEQRFCQQCSRFHLLAEFDDDKRSCRRRLAGHNERRRKPQFDYISGKPQKILQSCQGAKYFGASLQKRSQFVFHDVFQSGVFYSGKYEQSSQIGHIKFEDESIYGFQLEEPVITNGQDLSRASNSRSCALSLLSAQSNDLTRNSVGSLISQGICTQQGDDRVSETAFGISSLDKVVPSQSFSCETNSMEVTKNRPIMPSDLGHALQLEVHGDDNTDKHCPPDVEHGSTVDLFQLSSNLQRVEQQRNSLQVKHENDDSCFFPTM 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g1024 483 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 140 268 IPR044817 GO:0003677
Mibi10g1024 483 ProSiteProfiles Zinc finger SBP-type profile. 182 259 IPR004333 GO:0003677
Mibi10g1024 483 Pfam SBP domain 185 258 IPR004333 GO:0003677
Mibi10g1024 483 FunFam Squamosa promoter-binding-like protein 14 176 246 - -
Mibi10g1024 483 Gene3D - 176 246 IPR036893 GO:0003677|GO:0005634
Mibi10g1024 483 MobiDBLite consensus disorder prediction 79 99 - -
Mibi10g1024 483 SUPERFAMILY SBT domain 183 264 IPR036893 GO:0003677|GO:0005634
Mibi10g1024 483 Coils Coil 451 471 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi10g1024 Mibi-ChrMibi10 28827967 28830975 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi10g1024 135 481 SBP-box Gene Family AT1G69170 39.946 7.25e-60 200
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Mibi10g1024 SBP 2.5e-31 No_clan