Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g0987 ATGTCTGACAAAGAAAGTTTTGAGATAGCTAGAAACGAGGGTCATATGAGTTATTCGTCTAGTATGCCCTCGGATTGGAGATTTGGGGTTCCTAATCTTGCAAATACATCAGTGGGTTTGGTGGATTCATATGTTCCAAGCTTTTGGGATCATCCCATCAGTTCCCAAAACTTGGGGTCATGTGACATCAATGTGCAGAACAATGGTAGCTCCCCAAGCTCAATTGAGAATAGAAAAGATGGCCTTGCCTTAGCTGGTCATGATAGAACACTTGAAATGGGTTGGAACCCAAGTTCTATTTTGAAAGGGGATGCTTCTTTCTTACCAAACAGACCAACAATCTTCCCTCAGAGTTTGTCTCAGATTCCCACTGATTCTGCCTTTATTGAGCGAGCTGCAAGGTTCTCTTGCTTCAGTCAGTTCAATGGAGGGAGTTTTAGTAGTATGGTGAACTCATTTGGGATTCCTCAATCCATGGATCTGTACGCTGGAAGGGATAATGCTCTTGCTGGCCATGGCATAAAATCAGCTCATGGAGCTAAATCTCAAGAAAGTTCTCAGGATGTTGGTGAATCTGCTAAAGATGCGTCTCCATCTGTTCAGAATGTGGCCGCTAAAGGAAGTCCACTGAAGAATGACAACAGAAGTGAAAGACTAGTGTCATCTCAAGATGAGGCAAAACAGACTCTTGGCAGGTCTACTAATGAGTCTGATAGAGCAGAATCTAGTGGTGGTGATGATGATGCTGGTGGTCAAAATGATATGCCTATGTTGGAGGGTACGAGTGGGGAGCCTTCTAACAAAGGACTAGATGCAAAGAAAAGGAAAAGAAGTGTGCAGGATTCTGATAATGAAAAGGCCAATGGAGGTTCTGAACCGCCAAGTGAGGCTGCAATGGACAATTCTGAGAGCCGACAGAAGGGAGATCAACAACCAACTTCAACAACCAAGACTTCTGGTAAGAATACCAAACAGGGGTCTCAAGCTTCTGATCCACCAAAGGAGGAATATATACATGTTAGGGCTCGCAGGGGCCAAGCAACGAATAGCCATAGCCTTGCAGAGAGAGTAAGGAGGGAAAAGATCAGTGAGAGGATGAAATTTCTTCAAGACCTTGTACCTGGATGCAGCAAGGTGACTGGCAAGGCGGTTATGCTAGATGAAATCATAAACTATGTACAATCACTTCAGCGGCAGGTTGAGTTTTTGTCAATGAAACTTGCGACCGTAAATTCACGGCTGGATTTTAATCTTGAAGGACTTATTGCCAAAGATATGCTCCAGCAACGGCCTGGCCCCTCATCTGCATTGAGGTTTTCTCCAGAAATGCCTTTGGTTTTCCCTCCTTTACATCCATCTCAACCAGGCCTTCTACAGGCAAATCTTCATGGCATAGCAAATTCATCTGATATACTTCGAAGAACCATTCATCCACAGTTAACTCCCGCAGTTGGAGGATTCAAGGATCATCATAATCAGCTACCAGAGATGTGGGAGGATGAACTTCACAATGTTGTACAGATGAGCTATGCACCAACTGCTCCACCAAGTAGTCAAGACGAGGACGGTAATGCATCAGCAGGTGAGATGAAGGTTGAACTATGA 1605 0.4436 MSDKESFEIARNEGHMSYSSSMPSDWRFGVPNLANTSVGLVDSYVPSFWDHPISSQNLGSCDINVQNNGSSPSSIENRKDGLALAGHDRTLEMGWNPSSILKGDASFLPNRPTIFPQSLSQIPTDSAFIERAARFSCFSQFNGGSFSSMVNSFGIPQSMDLYAGRDNALAGHGIKSAHGAKSQESSQDVGESAKDASPSVQNVAAKGSPLKNDNRSERLVSSQDEAKQTLGRSTNESDRAESSGGDDDAGGQNDMPMLEGTSGEPSNKGLDAKKRKRSVQDSDNEKANGGSEPPSEAAMDNSESRQKGDQQPTSTTKTSGKNTKQGSQASDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNSRLDFNLEGLIAKDMLQQRPGPSSALRFSPEMPLVFPPLHPSQPGLLQANLHGIANSSDILRRTIHPQLTPAVGGFKDHHNQLPEMWEDELHNVVQMSYAPTAPPSSQDEDGNASAGEMKVEL 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g0987 534 MobiDBLite consensus disorder prediction 179 209 - -
Mibi10g0987 534 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 346 396 IPR011598 GO:0046983
Mibi10g0987 534 Gene3D - 343 418 IPR036638 GO:0046983
Mibi10g0987 534 Pfam Helix-loop-helix DNA-binding domain 349 397 IPR011598 GO:0046983
Mibi10g0987 534 CDD bHLH_AtBPE_like 336 421 - -
Mibi10g0987 534 FunFam Basic helix-loop-helix transcription factor 343 415 - -
Mibi10g0987 534 Coils Coil 393 413 - -
Mibi10g0987 534 SMART finulus 352 402 IPR011598 GO:0046983
Mibi10g0987 534 MobiDBLite consensus disorder prediction 284 330 - -
Mibi10g0987 534 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 216 446 IPR024097 GO:0006355
Mibi10g0987 534 MobiDBLite consensus disorder prediction 231 245 - -
Mibi10g0987 534 MobiDBLite consensus disorder prediction 175 334 - -
Mibi10g0987 534 MobiDBLite consensus disorder prediction 268 283 - -
Mibi10g0987 534 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 344 415 IPR036638 GO:0046983
Mibi10g0987 534 MobiDBLite consensus disorder prediction 511 534 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi10g0987 Mibi-ChrMibi10 28348967 28352102 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi10g0987 40 511 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G68920 45.073 2.67e-110 335
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mibi10g0987 HLH 6.8e-06 No_clan