Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g0971 ATGGCACAAGATACTTCTGCTGTTGATTCAAATCACAGGCGCCCTGGTCTATTGAAAGATCAAGTTTTCTTGGTTAAAAGGAAGGACTCTGATCGCTATGGGATTGCTCCTATCCAAGATCAACTGTCATTTGAGAAGGGTTTTTTTGTTGTAATCCGTGCCTGCCAGTTGTTGTCCCAAAATAATGAGGGAATAATATTGGTAGGGTTGGCTGGTCCTTCAGGGGCTGGGAAGACTGTATTATCTGACAAAATAGTCAATTTCATGCCCAGCATTGCAGTCATTTCGATGGACAATTACAATGATTCTAGTCGAATTATAGATGGAAATTTTGATGATCCACGCTTGACAGATTATGACACATTGCTCCAGAATCTACAAGATTTAAAGGCAGGAAAGTCAGCTCAGGTTCCAATCTACGATTTCAAGTCCAGTTCTCGTATAGGATACAGGACAGTTGAAGTCCCGAGCTCCCGAATCGTGATCATAGAGGGTATTTATGCTTTGAGTGAGAAGTTGCGACCTTTATTGGACCTTCGTATATCTGTTACAGGTGGAATTCATTTTGACCTTGTCAAGCGAGTAATACGTGACGTTCAACGTGCTGGTCAACAACCTGCAGAAATCATTCATCAAATATCTGAGACGGTATTTCCTATGTACAAGGTCTTTATCGAGCAAGACCTGCAGACAGCACATATCAAAATAAAAAACAAGTTCAATCCATTTACTGGATTCCAGAGTTCTACTTACATACTGAAATCAGCAAGGAATGTGACAGTTGAAGAAATTAAAGCTGTTTTATCTGAAGATTTTAAGGAAACAAATGAGCAGATTTATGACATATATCTTCTACCACCGGGTGAAGATCAAGAAACTTGCCAATCTTATTTACGAATGCGGAATAAGGAGGGGAAATACTGTCTAATATTTGAGGAATGGGTGACAGATAGTCCATTTGTCATTTCACCAAGAATAACTTTCGAGGTTAGTGTGCGGCTCCTTGGTGGCCTGATGGCCCTGGGATACACAATAGCTACCATTCTAAAAAGGAACAGCCATGTATTCTCTGATGATAGGGTGTCTGTGAAACTAGATTGGCTAGAGAAGCTTAATCGACAGTATGTTCAGGTGCAAGGAAAAGATCGCTCAATTGTAAAATACGTAGCCCAGCAGCTTGGCATGGAAGGTTCCTATATTGCTCGTACATACATTGAGCAAATACAATTGGAAAAGATTGTAGATGAGGTTATGGCCCTTCCAGATGATTTAAAAACAAAGCTTGGCCTAGATGAGGATATGGTGTCTAGCCCTAAAGAAGCACTTTCTAAAGCCTTTGCAGATCAGATTCCTGTGAGAAGAACGCACACGAGTGGTATGTCCCAGTCGTATACAAGCCAAAGGGACAAAAATCTACTCAAACATACTCGATATGGTGCCAGCAATAAAAGGTTTGGTGAAAGAAATCCAGATCCCTCCTTAGCACTAACAAATGAGCTTTCAGAACAAATATCTTCTCTCAATGATAGAATGGATGAGTTTACAAGTCGTATTGAAGAGCTGAATTCCAAGTTAAGGATCAATAAAAATTCTCCCAGCCAACAAACCACAGCATTCCATGCCGAAGTCTGCAATGGTTCTGCTCCCACCTCTCACTTCATCAGTAGTTTGGAAAATGGTTCTCTAACTGGATCTATCATGAAGTCTTCATCTTCATTGCAATTAGCCAAGGAGCCACCTTTATTGGATGAGATATTGTGTGTTGCAAAAGGGCAGCGCCAGATCATGCAGAAGGTGGAGTACCTCAGTAACCTTATCCATGGAGTTGTAAGCATGGGAGAAAGGTCTTGCCAAGCAAGGACAGGCATGTCTTCTGCTTCAGAATCCACTTCAGTCCGGGCCCTTCTTGCCATCACTTTTGGTTGTGTTGGGCTCTTCATGGTGAAGGGTTTGGTGTCTAGAACTTGA 1968 0.4151 MAQDTSAVDSNHRRPGLLKDQVFLVKRKDSDRYGIAPIQDQLSFEKGFFVVIRACQLLSQNNEGIILVGLAGPSGAGKTVLSDKIVNFMPSIAVISMDNYNDSSRIIDGNFDDPRLTDYDTLLQNLQDLKAGKSAQVPIYDFKSSSRIGYRTVEVPSSRIVIIEGIYALSEKLRPLLDLRISVTGGIHFDLVKRVIRDVQRAGQQPAEIIHQISETVFPMYKVFIEQDLQTAHIKIKNKFNPFTGFQSSTYILKSARNVTVEEIKAVLSEDFKETNEQIYDIYLLPPGEDQETCQSYLRMRNKEGKYCLIFEEWVTDSPFVISPRITFEVSVRLLGGLMALGYTIATILKRNSHVFSDDRVSVKLDWLEKLNRQYVQVQGKDRSIVKYVAQQLGMEGSYIARTYIEQIQLEKIVDEVMALPDDLKTKLGLDEDMVSSPKEALSKAFADQIPVRRTHTSGMSQSYTSQRDKNLLKHTRYGASNKRFGERNPDPSLALTNELSEQISSLNDRMDEFTSRIEELNSKLRINKNSPSQQTTAFHAEVCNGSAPTSHFISSLENGSLTGSIMKSSSSLQLAKEPPLLDEILCVAKGQRQIMQKVEYLSNLIHGVVSMGERSCQARTGMSSASESTSVRALLAITFGCVGLFMVKGLVSRT 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g0971 655 CDD UMPK_like 67 239 - -
Mibi10g0971 655 Pfam Phosphoribulokinase / Uridine kinase family 68 237 IPR006083 GO:0005524|GO:0016301
Mibi10g0971 655 ProSiteProfiles CYTH domain profile. 248 410 IPR023577 -
Mibi10g0971 655 PRINTS Uridine kinase signature 224 237 - -
Mibi10g0971 655 PRINTS Uridine kinase signature 132 147 - -
Mibi10g0971 655 PRINTS Uridine kinase signature 188 198 - -
Mibi10g0971 655 PRINTS Uridine kinase signature 65 82 - -
Mibi10g0971 655 SUPERFAMILY CYTH-like phosphatases 263 407 IPR033469 -
Mibi10g0971 655 Coils Coil 497 524 - -
Mibi10g0971 655 PANTHER URIDINE KINASE 32 423 - -
Mibi10g0971 655 Pfam CYTH domain 269 404 IPR023577 -
Mibi10g0971 655 Gene3D - 254 413 - -
Mibi10g0971 655 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 53 238 IPR027417 -
Mibi10g0971 655 Gene3D - 66 248 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi10g0971 Mibi-ChrMibi10 27811701 27819249 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi10g0971 66 225 PRT Gene Family AT5G40870 27.811 4.70e-16 79.3