Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g0969 ATGAAAGGAAGATATATGGGTTTCTTTTGTTTAGCACTGTTCTTCTCCTTGTGCAATTCTGTTTCTGGTTTGCTTTCTCCTAAAGGTGTAAACTTTGAAGTGCAAGCTTTAATGGGGATTAAAGCTTCTTTGGTGGATCCTCATTCTGCACTTTATAATTGGGATGGTGATGCTGTGGATCCTTGTAGCTGGGCTATGATCACTTGTTCTTCTGATCATTTTGTCATTGCCCTCGGAATTCCAAGCCAGAATATATCTGGGACTTTATCTCCAAGCATTGGGAACTTGACAAATCTACAGACTGTGCTCTTGCAAGATAACAATATATCAGGACCTATTCCTTCTGAGTTGGGGAGGCTCCAAAAACTTGAAACTCTTGATCTTTCTGATAATTCTTTTTCTGGTCAACTTCCTCATAGTTTTCCTCAAATGAAGAGTCTTCATTACCTGCGGCTGAATAATAACAGTCTCACTGGAGAAATTCCAATTTCTTTGGCTAATATGACCCAGCTTGCTTTTCTGGATATCTCTTATAATAACTTGAGTGGACCGGTACCTACAATAAATGCAACAACATACAATATTGTAGGCAATCCTCAGATATGTGCTACTGGAACTGAGCAAAACTGCTTTAGAACTTCTGTACTTTCTTCTTCCTTGAATATTTCTCAAGATTCACAACCCTCTGGTAGATCTAAACACCACAAAGTTGCTTTGGCATTTGCTTCAAGCATAAGCTGCATCTGCCTACTTATTGTTGGGTTTGGCTTCGTCCTATGGTGGAGACAAAGATATAACAAGCAAATTTTCTTTGATGTTAGTGAACAATACCGCGAAGAAATCTGCCTTGGAAACCTCAAGAAGTTCAATTTCAGAGAACTTCAGGCTGCTACAAGTAACTTCAGCAGCAAGAACTTGATTGGAAAAGGTGGATTTGGTAATGTGTACAAAGGGTGCCTCCCTGATGGCACAATTATAGCAGTGAAGAGGCTAAAAGATGGTAATGCTATTGGAGGTGAGATCCAATTCCAGACTGAAGTCGAGATGATTAGCCTAGCCGTGCACCGAAATCTCCTTCGCCTCTATGGATTTTGTATGACAGCCACCGAAAGACTCTTGGTTTATCCCTATATGTCCAATGGTAGTGTTGCTTCCCGTCTTAAAGCCAAGCCTGTTCTTGATTGGGGAACAAGAAAGAGGATAGCCCTAGGAGCTGGAAGGGGCTTGCTATATTTGCATGAGCAGTGTGACCCCAAGATCATTCACAGGGATGTGAAGGCCGCAAATATCTTGCTTGATGATGATTGTGAGGCCGTGGTGGGTGATTTTGGGTTAGCGAAGCTCTTGGATCACCATGATTCTCATGTTACAACAGCTGTTAGAGGCACTGTGGGGCACATAGCCCCAGAATATCTCTCAACAGGCCAGTCCTCTGAGAAAACAGATGTGTTTGGCTTTGGAATCCTCCTTCTTGAGTTAATCTCAGGCCAAAGAGCTCTTGAATTTGGAAAAGCAGTGAACCAGAAAGGAGCTATTCTTGATTGGGTGAGGAAGATTCATCAGGAGAAGAAGCTTGACTTGTTGGTTGACAAGGATCTGAAAATTAACTATGATAAGATTGAACTTGAAGAAATAGTTCAAGTGGCTCTTTTGTGTACTCAGTATCTTCCAAGTCAGAGACCAAAGATGTCTGAAGTGGTTAGGATGCTTGAAGGAGATGGGCTTGCAGAGAAATGGGAAGCCTCACAGAGAGCAGAATCAACAAGAAGCAGAGGGAATGAACTCTCTTCTTCAGAGAGATATTCTGATCTTACTGATGACTCTTCATTGCTTGCACAAGCAATGGAACTTTCTGGACCAAGGTGA 1866 0.4191 MKGRYMGFFCLALFFSLCNSVSGLLSPKGVNFEVQALMGIKASLVDPHSALYNWDGDAVDPCSWAMITCSSDHFVIALGIPSQNISGTLSPSIGNLTNLQTVLLQDNNISGPIPSELGRLQKLETLDLSDNSFSGQLPHSFPQMKSLHYLRLNNNSLTGEIPISLANMTQLAFLDISYNNLSGPVPTINATTYNIVGNPQICATGTEQNCFRTSVLSSSLNISQDSQPSGRSKHHKVALAFASSISCICLLIVGFGFVLWWRQRYNKQIFFDVSEQYREEICLGNLKKFNFRELQAATSNFSSKNLIGKGGFGNVYKGCLPDGTIIAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLYGFCMTATERLLVYPYMSNGSVASRLKAKPVLDWGTRKRIALGAGRGLLYLHEQCDPKIIHRDVKAANILLDDDCEAVVGDFGLAKLLDHHDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGQRALEFGKAVNQKGAILDWVRKIHQEKKLDLLVDKDLKINYDKIELEEIVQVALLCTQYLPSQRPKMSEVVRMLEGDGLAEKWEASQRAESTRSRGNELSSSERYSDLTDDSSLLAQAMELSGPR 621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g0969 621 Gene3D Phosphorylase Kinase; domain 1 270 377 - -
Mibi10g0969 621 MobiDBLite consensus disorder prediction 578 609 - -
Mibi10g0969 621 ProSiteProfiles Protein kinase domain profile. 301 580 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi10g0969 621 Pfam Leucine rich repeat N-terminal domain 33 70 IPR013210 -
Mibi10g0969 621 Gene3D Transferase(Phosphotransferase) domain 1 378 590 - -
Mibi10g0969 621 SUPERFAMILY Protein kinase-like (PK-like) 280 571 IPR011009 -
Mibi10g0969 621 ProSitePatterns Serine/Threonine protein kinases active-site signature. 420 432 IPR008271 GO:0004672|GO:0006468
Mibi10g0969 621 Gene3D Ribonuclease Inhibitor 30 212 IPR032675 -
Mibi10g0969 621 SMART serkin_6 301 570 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi10g0969 621 Pfam Protein kinase domain 302 568 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi10g0969 621 MobiDBLite consensus disorder prediction 588 609 - -
Mibi10g0969 621 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 11 581 - -
Mibi10g0969 621 ProSitePatterns Protein kinases ATP-binding region signature. 307 329 IPR017441 GO:0005524
Mibi10g0969 621 FunFam Putative LRR receptor-like serine/threonine-protein kinase 30 212 - -
Mibi10g0969 621 FunFam Somatic embryogenesis receptor kinase 1 270 377 - -
Mibi10g0969 621 Pfam Leucine rich repeat 122 181 IPR001611 GO:0005515
Mibi10g0969 621 FunFam Somatic embryogenesis receptor-like kinase 1 378 590 - -
Mibi10g0969 621 SUPERFAMILY L domain-like 33 195 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi10g0969 Mibi-ChrMibi10 27795546 27800919 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi10g0969 5 621 Receptor kinase-like Gene Family AT5G16000 73.962 0.0 951
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Mibi10g0969 Pkinase 3.4e-44 CL0016