Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g0954 ATGATGCCTCCCGAGCAAGAAACCACCACTGTACACGTCATGCCAAGCATTCCGGCCATCCCGAACCGGCCGCCGCCGGAGAATAGCTCCGTCCACGCCGAACCAGGAGGTTCCACTGCCATGGATGACAAGCCAAGTTCTGATAATCATGGCATTCCCCTTCATCAACAATCCTTGCGACCTGTTACCCTCAAATTTGAAGATGTTTCTTATAGTATAACCCTTATTGGGACCAAAATGAGAGGAGGCTGTTTCTCACCGGAAAACCCGAAACCGACCCGGAAAATCCTCAACGGCGTGACCGGAATAGTCCGGCCGGGCGAATTGATGGCAATGCTGGGCCCATCAGGCAGCGGAAAGACCACGCTACTCACTGCCCTCGCCGGCCGGCTCGCCGGAAAAATCTCCGGCGACATAACATACAATAACCTCCCATTTTCAAGCTCCATGAAACGCAAAACCGGTTTTGTCACACAAGATGATGTCTTATACCCTCACCTCACTGTCCAAGAAACTCTAGTCTTCACAGCTTTGTTAAGACTTCCCAAAACCTTAACCAAAGAAGAGAAAGTCCAACAAGCAGAAACGGTCATAACGGATCTCGGGTTGACCCGGTGCCGGAACACCGCCGTGGGCGGCGGCGCCGCCGTGTTCCGGGGGATTTCCGGCGGGGAGAGGAAGCGGGTTAGTATCGGGCAAGAGATGCTGGTGGACCCGTGTCTGATGCTGTTGGACGAGCCGACGTCCGGGCTGGACTCGACGGCGGCCCAACGGATAGTGGCGGTGCTCCGGGGGTTGGCGCGCCGGGGCCGGACGGTGGTGACAACTATTCATCAGCCGTCAAGCAGGTTGTATAGGATGTTTGATAAGGTGATTGTGTTATCGGACGGGTGCCTGATTTATACCGGGAGGTCGGGTCGGGTCATGGAGTATTTGGAGTCCATTGGGTACCCACCCAGTTTCAACTTCATGAACCCGGCTGATTTTCTGCTTGACCTTGCCAACGGCATTGTGGATGATGTTAAGGTGGATGATCAAACCGAGATGAATGGCAGATTAGAGCGCACTGAGGATCAAGCTTCAATAAAACAGTCTCTGGTTTCATCCTATAAAAAGATTTTATATCCTGCCCTGAAACAAGAGATTCAGCTAACTAATGGAGACAGAGTTAGTTCTACATCAGGAACACCCAGAAGCTCAGAGAAGCAGTGGAACACAGGCTGGTGGGAGCAATTCAGGGTTCTGCTTAAGAGGGGTTTACAGGAGAGGAGACATGAATCTTATTCAGGTCTAAAGATTTTCCAAGTCTTATCTGTCTCAATCCTCTCAGGACTTCTCTGGTGGCATTCTGATCCCTCACACGTACAAGATCAGGTAGGCCTGCTCTTCTTCTTCTCCATATTCTGGGGATTCTTCCCACTATTCAACGCGATCTTCGCATTCCCTTCGGAGAGGCCAATGCTGATAAAAGAAAGAGCTTCAGGAATGTACCATCTCTCATCCTACTACGTAGCCAGAATGATAGGTGACCTACCAATGGAACTTGTCCTCCCAACAATCTTTGTCACCATAAGCTATTGGATGGGAGGCCTCAAGCCTTCACTAATCACCTTCATATTAACCCTCTTAATCATCATCTTAAATGTACTTGTCTCCCAAGGAATAGGCCTGGCACTTGGAGCCATATTAATGGAAGTGAAGCAAGCAACAACCTTAGCTTCAGTGACCATGCTGGTTTTTCTTCTAGCTGGTGGCTATTACATTCAGAAAATACCATCTTTCATAGCTTGGTTGAAGTACATATCTTTCAGTCACTACTGCTATAAGCTACTGGTAGGAGTGCAATATGAAGAAAATGAGGTTTATGAATGTGGATTAGGGTTGCACTGTAGGGTAATGGATTTCCCTGCTATAAAGTGTTTGGGAGGTCTTGATAATTTGTGGGCTGATGTGGCAACATTGTGTGTGATGTTGATTGGTTACAGAGTTTTGGCTTATTTGGCTTTGAGGATAAGGCAGCCTCACTGA 2028 0.4896 MMPPEQETTTVHVMPSIPAIPNRPPPENSSVHAEPGGSTAMDDKPSSDNHGIPLHQQSLRPVTLKFEDVSYSITLIGTKMRGGCFSPENPKPTRKILNGVTGIVRPGELMAMLGPSGSGKTTLLTALAGRLAGKISGDITYNNLPFSSSMKRKTGFVTQDDVLYPHLTVQETLVFTALLRLPKTLTKEEKVQQAETVITDLGLTRCRNTAVGGGAAVFRGISGGERKRVSIGQEMLVDPCLMLLDEPTSGLDSTAAQRIVAVLRGLARRGRTVVTTIHQPSSRLYRMFDKVIVLSDGCLIYTGRSGRVMEYLESIGYPPSFNFMNPADFLLDLANGIVDDVKVDDQTEMNGRLERTEDQASIKQSLVSSYKKILYPALKQEIQLTNGDRVSSTSGTPRSSEKQWNTGWWEQFRVLLKRGLQERRHESYSGLKIFQVLSVSILSGLLWWHSDPSHVQDQVGLLFFFSIFWGFFPLFNAIFAFPSERPMLIKERASGMYHLSSYYVARMIGDLPMELVLPTIFVTISYWMGGLKPSLITFILTLLIIILNVLVSQGIGLALGAILMEVKQATTLASVTMLVFLLAGGYYIQKIPSFIAWLKYISFSHYCYKLLVGVQYEENEVYECGLGLHCRVMDFPAIKCLGGLDNLWADVATLCVMLIGYRVLAYLALRIRQPH 675
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g0954 675 MobiDBLite consensus disorder prediction 1 56 - -
Mibi10g0954 675 ProSitePatterns ABC transporters family signature. 221 235 IPR017871 GO:0005524|GO:0016887
Mibi10g0954 675 FunFam ABC transporter G family member 22 84 315 - -
Mibi10g0954 675 MobiDBLite consensus disorder prediction 42 56 - -
Mibi10g0954 675 Pfam ABC-2 type transporter 410 616 IPR013525 GO:0016020|GO:0140359
Mibi10g0954 675 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 64 321 IPR003439 GO:0005524
Mibi10g0954 675 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 44 666 - -
Mibi10g0954 675 SMART AAA_5 106 298 IPR003593 -
Mibi10g0954 675 Pfam ABC transporter 97 249 IPR003439 GO:0005524
Mibi10g0954 675 Gene3D - 79 315 IPR027417 -
Mibi10g0954 675 Pfam ABC-2 type transporter 278 342 IPR043926 GO:0140359
Mibi10g0954 675 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 92 313 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi10g0954 Mibi-ChrMibi10 27607816 27611776 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi10g0954 91 310 Calmodulin-binding Proteins AT2G36910 25.217 1.08e-09 60.1